Streptomyces violaceusniger: Strvi_1506
Help
Entry
Strvi_1506 CDS
T01602
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03420
Nucleotide excision repair
svl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Strvi_1506
03430 Mismatch repair
Strvi_1506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_1506
Enzymes [BR:
svl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Strvi_1506
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Strvi_1506
MMR (mismatch excision repair)
Other MMR factors
Strvi_1506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Babuvirus_MP
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
AEM81246
UniProt:
G2NXY9
LinkDB
All DBs
Position
1373937..1376231
Genome browser
AA seq
764 aa
AA seq
DB search
MTAATSSTLFPQGSTPGSYAATPRDADAVLDGLDPEQREVATSLHGAVCVLAGAGTGKTR
AITHRIAYGVRAGMLQPASVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQY
FWPKAVGGEVPRLVERKVQLVAEAATRCRVRLDRNELRDVTGEIEWSKVTQTVPEDYPAV
AAKSGREAPRDAAEIGRIYATYEQLKRDRGVIDFEDVLLLTVGVLQERHDIADQVRRQYQ
HFVVDEYQDVSPLQQRLLELWLGDRDSLCVVGDASQTIYSFTGATPDHLLDFRTRHPGAT
VVKLIRDYRSTPQVVHLANGLLSQARGRAAEHRLELVSQREAGPDPVYAAYADEPAEAEG
TARRIRELITPVEQGGGGVPASQIAVLYRVNAQSELYEQALADAQVPYQLRGAERFFERP
EVREAGLLLRGAARGRSTDPALADADIPSQVRAVLGTRGWTPEPPAGSGAVRDRWESLAA
LVRLAEDFAGSRPGATLSDLVAELDERAAAQHAPTVEGVTLASLHAAKGLEWDAVFLVGL
TEGMVPITYAKTDQQIEEERRLLYVGVTRARHHLTLSWALSRAPGGRASRRPTRFLNGLR
PGSQAVGARTLGGAGGIERGAAAPGGGGGVRRRRGPVHCRVCGRALTDAGEMKLMRCEGC
PSELDEALYERLRDWRAEQAGLLGQPAYCVFTDKTLLAIAEAVPGTGSELARIAGVGRRK
LDRFGADVLALCEGRELPSAVDGEGDDGAGGSHSGDPWQNSTEK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcagcaacgtcctccactctgttcccgcagggctccacaccgggttcctacgcg
gccacgccgcgtgacgccgacgcggtgctcgacgggctcgaccccgagcagcgcgaggtg
gcgacgtccctgcacggcgcggtgtgcgtgctggccggggccggcaccggcaagacccgc
gccatcacccaccggatcgcctatggggtgcgcgcgggcatgctccagcccgccagtgtg
ctggccgtcaccttcaccaaccgggcggcgggggagatgcgcggccggctgcggcagctc
ggcgcgggcggggtgcaggcgcgcaccttccactcggcggccctgcggcagttgcagtat
ttctggcccaaggcggtcggcggtgaggtgccgcggctggtcgagcgcaaggtgcagctc
gtggcagaggccgccacgcggtgccgggtccggctggaccgcaatgagctgcgggacgtg
accggcgagatcgaatggtcgaaggtcacccagaccgtgcccgaggactatccggccgtg
gccgccaaatccggccgggaggccccccgcgacgccgccgagatcggccggatctacgcc
acctatgagcagttgaagcgcgaccgcggcgtcatcgacttcgaggatgtgctgctcctc
acggtcggtgtgctccaggagcggcacgacatcgccgatcaggtgcgccgtcagtaccag
cacttcgtggtcgacgagtaccaggacgtcagcccgctgcagcagcggctgctggagctg
tggctgggcgaccgggacagcctgtgcgtggtcggggacgccagccagaccatctactcc
ttcaccggcgccacccccgaccatctgctggacttccgcacccgccaccccggggccacg
gtggtcaagctgatccgggactaccgctccaccccgcaggtggtccacctggccaatggg
ctgctctcccaggcccgcggccgggccgccgagcaccggctggagctggtctcccagcgg
gaggcgggccccgacccggtctacgccgcctatgcggacgagccggccgaggccgagggc
accgcccgccggatccgcgagctgatcaccccggtcgagcaggggggcggcggcgtcccg
gcgagccagatcgcggtcctctaccgggtcaacgcccagtcggagctctatgagcaggcg
ctggccgatgcccaggtgccctatcagctccgcggcgccgagcggttcttcgagcggccc
gaggtgcgcgaggcggggctgctgctgcgcggcgcggcccgcggcagaagtaccgacccg
gcgctggcggatgccgacatcccgtcccaggtgcgggccgtgctgggcacgcgtggctgg
acgcccgagcccccggcggggtcgggcgcggtgcgcgaccgctgggagtccctggccgcc
ctggtgcggctcgccgaggacttcgcgggcagccgccccggggccacgctttccgatctg
gtggcggagctcgacgagcgggcggcggcgcagcacgccccgaccgtcgagggtgtgacc
ctcgcctcactccacgcggccaagggcctcgaatgggacgccgtcttcctggtcggtctc
accgaggggatggtgccgatcacctacgccaagacggaccagcagatcgaggaggagcgt
cggctgctctatgtgggggtcacccgcgcccgtcaccatctgacgctgtcctgggcgctc
tcgcgggctccgggcggccgggcctcccgtcgccccacccgctttctcaacgggctgcgg
cccggctcccaggccgtgggcgcccgcaccctcggcggggccggcggaatcgagcgcggg
gcggcggccccgggcgggggcggcggggtgcgcaggcggcgcggtccggtccactgccgg
gtgtgcggccgggcgctgaccgacgcgggcgagatgaagctgatgcgctgcgagggctgc
ccgtccgagctggacgaggcgctctatgagcggctgcgcgactggcgggcggagcaggcg
gggctgctgggacagccggcctattgcgtgttcaccgacaagacactgctcgcgatcgcc
gaggccgttccgggaaccggatcggagctcgcccgcatcgccggtgtcggacgacgcaag
ctcgaccggttcggagccgacgttctcgcgctgtgcgaggggcgggaactgccctcggca
gtcgatggcgagggggacgacggtgccgggggaagccattcgggtgacccttggcaaaac
tcgacggaaaaatag
DBGET
integrated database retrieval system
