Streptomyces violaceusniger: Strvi_1739
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Entry
Strvi_1739 CDS
T01602
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svl03021
]
Strvi_1739
Transcription machinery [BR:
svl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Strvi_1739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
TnsD
HTH_30
HTH_23
HTH_28
Med9
Motif
Other DBs
NCBI-ProteinID:
AEM81477
UniProt:
G2NT57
LinkDB
All DBs
Position
1624427..1625056
Genome browser
AA seq
209 aa
AA seq
DB search
MRTRVRAGDPDAFAELFDAYAQAVYHHAFRLTADWSVAEDVMSATFMEAWRRRTAVDAEG
GSLRPWLLGIGTNVARTHCRSNRRYRAAAAAAAEAGPDSLRIPDHAEETAGRVDDRRRIN
ATLTALASLKRAEREVLVLCLWEGMEYADVARTLHIAIGTVRSRLSRARTKLRKLADAEL
GRKKRELTPLTRQVKGDRNHAIRSAEEGI
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacccgggtgcgggccggggatccagatgcgttcgcggagctgttcgacgcctac
gcgcaggccgtctaccaccacgccttccgcctgaccgccgactggtcggtggccgaggac
gtcatgtcggcgacgttcatggaggcgtggcggcgccgtacggcggtcgatgccgaaggg
ggatccctgcggccctggctcctgggcatcggcaccaacgtcgcccgtacccactgccgt
agcaaccgccgataccgggctgccgccgccgctgccgccgaggcggggcccgactcgttg
cggatccccgaccacgccgaggagacggccggacgcgtggacgaccggagacgcatcaac
gccacgctcaccgccctcgcttcgctgaagcgcgccgaacgcgaggtcctcgtcctctgc
ctctgggagggcatggagtacgccgacgtcgcccgcaccctccacatcgccatcggaacc
gtccgctccaggctgtcccgagcccgtaccaagctgcgcaaactcgccgacgccgaactg
ggccgcaaaaaacgggaactcactccgctcacccggcaggtaaagggcgatcgcaaccac
gcgatccggtccgcagaggaaggaatctga
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