Streptomyces violaceusniger: Strvi_1907
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Entry
Strvi_1907 CDS
T01602
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svl03032
]
Strvi_1907
03036 Chromosome and associated proteins [BR:
svl03036
]
Strvi_1907
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_1907
DNA replication proteins [BR:
svl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Strvi_1907
Chromosome and associated proteins [BR:
svl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Strvi_1907
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Strvi_1907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AEM81642
UniProt:
G2P2A0
LinkDB
All DBs
Position
1820554..1821126
Genome browser
AA seq
190 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAAEAVDAVLDAIVRAVVAGERVSVTGFGSFEKVERPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLQVAAKKAAAK
KATAKKAPAKKTTAKKATAKTAPAKAAAKKAPAKKATAKTAPAKAAAKKAPARKTSARKT
TTKKTTARKR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggttggcggccgtcagcaggcc
gccgaagccgtcgacgcagttctggacgccatcgtccgggcggtcgtcgccggggagcga
gtttcagtcactggatttggttcgttcgagaaggtggaacggcccgcccggtacgcccgt
aacccgcagaccggggagcgcgtgagggtcaagaagacctcggtgccccgcttccgtgcc
ggtcaggggttcaaggacctggtgagcggctccaagaagctcccgcgcggcggtgaggtc
gccgtgaagaaggcccccaagggcagcctccaggtcgccgcgaagaaggccgcggccaag
aaggcgaccgccaagaaggctcctgcgaagaagacgacggccaagaaggcgacggccaaa
acggccccggccaaggccgccgccaagaaggcccccgccaagaaggcgacggccaagacg
gcgcccgccaaggccgccgccaagaaggccccggcgcgcaagacgagcgcccgtaagacc
accacgaagaagaccaccgccaggaagcgctaa
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integrated database retrieval system
