Streptomyces violaceusniger: Strvi_2071
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Entry
Strvi_2071 CDS
T01602
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Strvi_2071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svl03019
]
Strvi_2071
03016 Transfer RNA biogenesis [BR:
svl03016
]
Strvi_2071
Enzymes [BR:
svl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Strvi_2071
Messenger RNA biogenesis [BR:
svl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Strvi_2071
Transfer RNA biogenesis [BR:
svl03016
]
Prokaryotic type
tRNA degradation factors
Strvi_2071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
CdsD_C
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AEM81803
UniProt:
G2NTF5
LinkDB
All DBs
Position
2009922..2012180
Genome browser
AA seq
752 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTVSKNPKDQ
LDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHSELEEA
VFDMVVAGRVLEDGDVAIMMVEAEATQQTIQLVKDGAEAPTEEIVAAGLEASKPFIKVLC
KAQADLAAKAAKPTAEFPIFLDFQDDILEALTAAVRDELAQALTIAGKQEREAELDRVKG
LAAEKLLPQFEGREKEISAAYRALTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLAPETRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALLPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAVDGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLKVGAKVQVEIAEIDQRGKLSL
IPVLEDGEGGSDADADEASDEAQPQSKDEAAK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagcagtcatcgacaacggcaccttcggcacccgc
accatccgtttcgagacgggccgcctggcccgtcaggccgccggttcggccgtggcctac
ctggacgacgacaccatggtgctgtcggccaccaccgtttccaagaaccccaaggaccag
ctcgacttcttcccgctcacggtcgatgtcgaggagcggatgtacgcggcggggcgcatc
cccggctcgttcttccgccgtgagggccgcccctccgaggacgcgatcctcacctgccgt
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgagacgatcatggcgctcaaccccgaccacctctacgacgtggtcgcgatcaacgcc
gcctcctgctccacgcaactggccgggctgcccttctccggtccgatcggcggtacccgc
gtcgccctgatcaagggccagtgggtggccttcccgacccactccgagctggaggaggcc
gtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccacccagcagaccatccagctggtcaaggatggcgccgaggccccc
accgaggagatcgtcgccgccggcctggaggcgtcgaagcccttcatcaaggtcctgtgc
aaggcgcaggcggacctcgccgccaaggccgccaagccgaccgccgagttcccgatcttc
ctcgacttccaggacgacatcctggaggcgctgaccgccgccgtccgcgacgagctggcc
caggcgctgaccatcgcgggcaagcaggagcgcgaggccgagctggaccgggtcaagggc
ctggccgccgagaagctgctgccgcagttcgagggacgcgagaaggagatctccgccgcg
taccgcgcgctgaccaagaccctggtgcgcgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggcgattccgcgg
gtccacggctcggcgctgttcgagcgcggcgagacccagatcctgggcgtcaccacgctg
aacatgctccgcatggagcagcagctggacacgctcgcgcccgagacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggtgagaccggccgcgtcggctcgccc
aagcgccgcgagatcggccacggcgccctggccgagcgggcgctgctgcccgtgctgccg
acgcgcgaggagttcccgtacgccatccgccaggtctccgaggcgctcagctccaacggc
tcgacctccatggggtcggtctgcgcttcgacgatgtcgctgctcaacgccggtgtgccg
ctgaaggcgccggtcgcgggcatcgccatgggcctgatctcccaggagatcgacggcgag
acccactacgtcaccctcaccgacatcctcggtgcggaggacgcgttcggcgacatggac
ttcaaggtcgccggcaccaagcagttcgtcaccgcgctgcagctggacaccaagctggac
ggcattccggcgtccgtgctggccgcggccctcaagcaggcccgcgacgcccggctgcac
atcctcgatgtgatgaacgaggccatcgacgtcccggacgagatgtcccccaacgcgccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcaccatcgaggacgacggc
accatctacatcggtgccgtcgacggcccggccgccgaggccgcccgcgcgaccatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtgaag
accaccaccttcggtgccttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctggccggtggcaagcgcgtggagaacgtcgaggacgtgctgaag
gtcggcgccaaagtccaggtcgagattgccgagatcgaccagcgcggcaagctctccctc
atcccggtcctcgaggacggagagggcggctcggacgcggatgcggacgaggcgagcgac
gaagcgcagccccagtcgaaggacgaagccgccaagtga
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