Streptomyces violaceusniger: Strvi_2350
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Entry
Strvi_2350 CDS
T01602
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03030
DNA replication
svl03430
Mismatch repair
svl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Strvi_2350
03430 Mismatch repair
Strvi_2350
03440 Homologous recombination
Strvi_2350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svl03032
]
Strvi_2350
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_2350
Enzymes [BR:
svl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Strvi_2350
DNA replication proteins [BR:
svl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Strvi_2350
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Strvi_2350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEM82074
UniProt:
G2NYK7
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All DBs
Position
2348619..2349341
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AA seq
240 aa
AA seq
DB search
MGWHRGLLIGFDLETTGTDPRTSRIVTAAVVEVRDGEPIGRREWLADPQVPIPDGAVAVH
GITNERAAAEGRSAREVVEEVAEVLVAHWRAGAPVVAYNAAFDLSLLAAELGRHGLRPLS
ERLEGAETGPVVDPYTIDRAVDRYRKGKRTLEAVCGEYGVVHDRAHDAGADALAAVRVAC
ALAERHREVAGLELWDLHRKQVGWYAGWAADFQSWLRRKGTPDAVVDGGWPLREAGAVMG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcatcgggggctgctgatcggattcgatctggagacgacgggcaccgatccg
cggacgtcacggatcgtgacggcagccgtggtcgaggtgagggacggggagccgataggg
cggcgcgagtggctggccgatccccaagtgcccatccccgacggcgccgtggcggtccac
ggcatcaccaatgagcgggcggcggcggagggccggtccgcgcgtgaggtggtcgaggag
gtcgccgaggtgctggtggcccactggcgcgccggcgccccggtggtggcgtacaacgcg
gcgttcgatctcagcctgctcgccgccgagttggggcggcacgggctgcgcccgctgagc
gagcggttggagggcgcggagaccggccccgtggtggatccgtacacgatagatcgcgcg
gtcgaccgctatcgcaagggcaagcgcacgctggaggcggtctgcggggagtacggggtg
gtgcacgaccgagcccatgacgccggtgcggacgcgctggcggcggtgcgggtcgcctgc
gcgctcgccgagcgccaccgcgaggtggccgggctcgagctgtgggacctccaccgcaag
caggtggggtggtacgcgggctgggcggccgacttccagtcctggctgcgccgcaagggc
accccggacgcggtcgtggacggcggctggcccctgcgggaggccggcgcggtgatgggg
tag
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