Streptomyces violaceusniger: Strvi_2490
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Entry
Strvi_2490 CDS
T01602
Name
(GenBank) DNA repair protein and transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Strvi_2490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svl03000
]
Strvi_2490
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_2490
Enzymes [BR:
svl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Strvi_2490
Transcription factors [BR:
svl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Strvi_2490
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Strvi_2490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AEM82210
UniProt:
G2PCN2
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All DBs
Position
2500019..2501494
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AA seq
491 aa
AA seq
DB search
MHTDTDRCLRAAQAKDARFDGWFFVAVVTTGIYCRPSCPVVGPKAENMRFHPSAAAAQQA
GFRACKRCRPDASPGSPQWNERADLVARAMRLIADGVVDRDGVPGLAARLGYSTRQVERQ
LLAELGAGPLALARAQRAQTARLLIETSALPMADIAFAAGFASVRAFNETVREVFALSPT
ELRQRATRGPRTSVPGALTLRLPFRAPLCPDNLFGHLAATAVPGVEEWRDGAYRRTLRLP
YGPGVVTLSPRPDHIACQLSLADLRDLAGAISRCRRLLDLDADPTAVDDLLRTDLQLAPL
VDKAPGRRVPRAVDADEFAVRAVLGQQVSTAAARTHAGRLVAAHGEPVEDPGGGLTHLFP
SVQALAGLDPETLAMPRTRRATLTGLVGALAEGRVALGVGSDWDDARAALGTLPGLGPWT
VEVIAMRALGDPDAFVPTDLGVRRAAAELGLPATPGALTRHSARWRPWRAYAVQHLWATD
AAHAINRLPAA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgaccgctgtctccgcgccgcacaggcgaaggacgcccgcttcgac
gggtggttcttcgtcgccgtcgtgaccaccgggatctactgtcggccgagctgtccggtc
gtcgggcccaaggccgagaacatgcgtttccaccccagcgccgcggccgcccagcaggcc
gggttccgggcctgcaagcggtgccgtccggacgccagccccggatcgccgcagtggaac
gagcgcgccgacctcgtcgcgcgggccatgcggctgatcgccgacggcgtggtggaccgg
gacggggtgccggggctggcggcccggctgggatacagcacccggcaggtcgagcggcag
ttgctcgccgagctcggcgcgggcccgctcgcgctggccagggcgcagcgggcacagacc
gcgcggctgctcatcgagaccagcgcgctcccgatggcggacatcgccttcgcggccggg
ttcgccagcgtccgcgcgttcaacgagaccgtacgggaggtcttcgcgctctccccgacc
gagctgcggcagcgggccacccgcgggccgcgcaccagcgtgccgggggcgctcaccctg
cggctgccgttccgggcgccgctgtgcccggacaacctcttcgggcatctggccgccacc
gccgtccccggagtcgaggagtggcgcgacggcgcctaccggcggacgctgcggctgccg
tacgggcccggggtggtcaccctgagcccacggccggaccacatcgcctgccagctctcg
cttgccgacctccgcgacctggccggggcgatcagccgctgccgacggctgctggacctc
gacgcggacccgaccgccgtggacgacctgctgcgtacggaccttcaactggcgccgctg
gtcgacaaggccccggggcggcgggtgccgcgcgcggtggacgcggacgagttcgcggtg
cgcgccgtgctcggccagcaggtgtccacggccgccgcccgcacccacgccgggcggctg
gtggcggcgcacggcgagccggtggaggacccggggggcggcctgacccacctcttcccg
tccgtccaggccctcgccgggctggaccccgagacgctggccatgccccgcacccgccgc
gccaccctcaccgggctggtcggcgcgctcgccgagggccgggtcgcactcggcgtcggc
agcgactgggacgacgcccgcgcggccctgggcacgctgccggggctcggcccctggacc
gtcgaggtgatcgcgatgcgcgccctcggcgacccggacgccttcgtcccgaccgacctc
ggggtgcggcgcgccgccgccgaactgggactgcccgccacgcccggcgccctcacccgc
cactcggcacgctggcgcccctggcgcgcgtacgccgtccagcacctctgggcgacggat
gccgcccacgccatcaaccgcctgcccgcggcgtga
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