KEGG   Streptomyces violaceusniger: Strvi_3014
Entry
Strvi_3014        CDS       T01602                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
svl  Streptomyces violaceusniger
Pathway
svl03030  DNA replication
svl03430  Mismatch repair
svl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:svl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Strvi_3014
   03430 Mismatch repair
    Strvi_3014
   03440 Homologous recombination
    Strvi_3014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svl03032]
    Strvi_3014
   03400 DNA repair and recombination proteins [BR:svl03400]
    Strvi_3014
Enzymes [BR:svl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Strvi_3014
DNA replication proteins [BR:svl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Strvi_3014
DNA repair and recombination proteins [BR:svl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Strvi_3014
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: AEM82711
UniProt: G2PDW1
LinkDB
Position
complement(3105535..3106260)
AA seq 241 aa
MPSWFEGPLAAFDTETTGVDVEHDRIVSAALVVQRGTGSLPEIRRWLVSPGVPVPPAATE
IHGLTDAHLQRHGRWPAPVMDEMARAIAEQTARGTPLVVMNAPFDLTLLDRELKRHRNSS
LAGYLSLRSMSVLDPRVLDKHLDRYRKGRRTLLDLCAHYGVELTGAHDAAADAAASLHVV
RAVGRRFASRLEMLTPAELHARQTIWYAAQARGLQAWFALNGSDEICDPAWPLRPDLAAA
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgccgtcctggttcgaggggccgcttgctgcctttgacacggagaccacgggtgtcgat
gtcgagcatgaccggatcgtgtcggcggcgctggtggtacagcgcgggaccggaagtctg
ccggagatccggcgttggctggtgagtccgggggtgccggtgccgccggccgccaccgag
atacacggcctgaccgatgcccatctgcagcgtcacggcagatggccggcgccggtgatg
gacgagatggcgcgggcgatagccgagcagaccgcgcggggcaccccgctggtggtgatg
aacgcgccgttcgatctcaccctgctggaccgggagttgaagcggcatcgcaactccagc
ctggcgggctatctttcgctgcgctcgatgagcgtgctggatccgcgcgtgctggacaag
catctggaccgctatcgcaagggccgccgcaccctgctcgatctgtgtgcgcactacgga
gtggagctgaccggcgcgcatgacgcggcggcggacgcggcggcctccctgcacgtggtg
cgggcggtgggccgccggttcgcctcccggctggagatgctcacacccgccgagctgcac
gcccgccagacgatctggtacgcggcgcaggcccgggggctgcaggcgtggttcgcgctc
aacggctcggacgagatctgcgatccggcctggccgctgcgtcccgacctcgcggccgcg
gcctga

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