Streptomyces violaceusniger: Strvi_3116
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Entry
Strvi_3116 CDS
T01602
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
svl
Streptomyces violaceusniger
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Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_9
PAS_3
PAS
PAS_8
PT
Hom_end
Motif
Other DBs
NCBI-ProteinID:
AEM82812
UniProt:
G2PDY4
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Position
3224886..3227132
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AA seq
748 aa
AA seq
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MTSESGGPRCDRGAGDAAGPPAPTEKDQLRRFAGIWCRAVHPLAATTMTSDEFEVYLLPL
AHRLSAALRGSPFDTEAAYTVGAALVNAQCTEPEALPAILGVIDAHLVSCSAPTGPPSAA
PTAEPPAAPGHEPLSEEEARARCVRLQHALAAGFVRELRKCERDEQEAISRAALAARTEA
EKALHASEAKFQAVFEGAVIGVGIAGLDGEVLVVNDAMARMFGGMDFFRPGRNVTEFVHP
DDVPGAHELYRELVNGERDHFRIEKPHYRDDGSELWTNLTVTLLRDSSGAPQYQLALAED
ITEHRQLRERLRYEATHDELTGLPNRTLFLERLDQVLAAGADAERFGVCYLDLDGFKAVN
DSLGHAAGDRMLKAVAKRLQDCVKTPAELIARVGGDEFLALVTGPAAQADGAGLARRMLA
ALAEPVRVEGRELRVRASIGVVDGRAGEIGRAEVLRSADITMYRAKAAGGNRYEIADADS
NARVIARHSLTNGLPSALEKGEFFIEYQPLVRLTDGTVRGAEALVRWLHPVHGVLGPDQF
IPLAEDTGLIVPLGRWVLEQAARQAREWRDADEDDGEPLRVNVNLSPCQLSHPTLVSDTV
AVLENAGLCPSALCLEVTENDLIGADESALRPLRQLADLGMDIALDDFGTGYSNLSYLRR
LPVSTLKLDRSFTRGMQRAPADPVDVKIVEGIVSLAHTLDLAVTVEGVETAVQAEHLRGL
GCDTAQGWYYARPGPPERLHTLALADAS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgaatcgggcgggccgagatgtgaccgcggcgccggggacgccgccgggccc
cccgcccccacggagaaagatcagttgaggcggttcgcgggcatctggtgccgggccgtc
cacccgctggcggccacgacgatgacctccgacgagttcgaggtctatctgctgccgctg
gcccaccggttgagcgccgccctacgcggctctcccttcgacaccgaggcggcgtacacg
gtcggggccgcgctggtgaacgcgcagtgcaccgagccggaagcgctgcccgccatcctg
ggcgtcatcgacgcgcacctggtgtcctgctcggcgcccaccgggccaccctctgccgcg
ccgaccgccgaaccgcccgccgcgcccggccacgagcccctgtccgaggaggaggcgcgc
gcccgctgtgtgcggctgcagcacgccctcgccgccgggttcgtccgcgagctgcgcaag
tgcgagcgcgatgagcaggaggccatctcgcgggccgcgctggccgcccggaccgaggcc
gagaaggcgctgcacgcgagcgaggccaagttccaggccgtcttcgagggcgcggtcatc
ggcgtgggcatcgccggactcgacggcgaggtgctcgtcgtcaacgacgccatggcccgg
atgttcggcgggatggacttcttccgccccggccgcaacgtcaccgaattcgtccacccc
gacgacgtaccgggcgcccatgagctctaccgcgagctggtcaacggggagcgcgaccac
ttccgcatcgagaagccgcactaccgcgacgacggcagcgagctgtggaccaatctcacg
gtcaccctgctccgcgactccagcggcgccccgcagtaccagctcgccctcgccgaggac
atcaccgagcaccggcaactgcgcgagcggctgcgctacgaggccacccacgacgagctg
accggactgcccaaccgcaccctgttcctggagcggctggaccaggtgctggccgccggc
gcggacgccgagcggttcggcgtgtgctatctggacctggacggcttcaaggccgtcaac
gacagcctcgggcacgccgccggcgaccgcatgctcaaggccgtcgccaagcgcctccag
gactgtgtgaaaactcccgccgagctcatcgcccgggtcggcggcgatgagttcctggcc
ctggtcaccggccccgcggcgcaggccgacggcgccgggctggcccgccggatgctcgcc
gcgctcgccgaacccgtccgggtcgagggccgtgagctgcgggtacgggccagcatcggc
gtggtcgacggccgggcgggggagatcggccgggccgaggtgctgcgcagcgccgacatc
acgatgtaccgggccaaggccgcgggcggcaaccgctatgagatcgccgacgccgactcc
aacgcccgggtgatcgcccgccacagcctcaccaacgggctgccctccgccctggagaag
ggcgagttcttcatcgagtaccagccgctggtacggctcaccgacggcaccgtgcgcggt
gcggaggcgctcgtacgctggctgcatccggtgcacggcgtgctcggccccgaccagttc
atcccgctcgccgaggacaccgggctgatcgtgccgctcggccgctgggtgctggagcag
gccgcccggcaggcgcgggagtggcgcgacgccgacgaggacgacggcgagccgctgcgc
gtcaacgtcaatctctcgccgtgccaactgagccaccccacgctggtctccgacacggtg
gcggtcctggagaacgccgggctatgccccagcgcgctgtgcctggaggtcaccgagaac
gacctcatcggcgccgacgagagcgccctgcggcccctgcggcaactcgccgacctcggc
atggacatcgccctggacgacttcggcaccggttactccaacctgtcgtacctgcgccgg
ctcccggtctccacgctcaagctggaccgttccttcacccggggcatgcagcgggccccg
gccgatccggtcgacgtcaagatcgtcgagggcatcgtctcgctcgcccacacgctggac
ctcgcggtgacggtcgagggcgtggagacggccgtacaggccgagcatctgcgggggctg
ggctgtgacaccgcccagggctggtactacgcccgcccgggcccgcccgagcgactgcac
accctggcactggccgacgcgagctga
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