Streptomyces violaceusniger: Strvi_3138
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Entry
Strvi_3138 CDS
T01602
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03030
DNA replication
svl03430
Mismatch repair
svl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Strvi_3138
03430 Mismatch repair
Strvi_3138
03440 Homologous recombination
Strvi_3138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svl03032
]
Strvi_3138
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_3138
Enzymes [BR:
svl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Strvi_3138
DNA replication proteins [BR:
svl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Strvi_3138
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Strvi_3138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEM82833
UniProt:
G2PE05
LinkDB
All DBs
Position
complement(3285931..3287847)
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AA seq
638 aa
AA seq
DB search
MSIIPTSFDVPAMGDYAYDWALVDVETSGLMARRDRVLSVAVITVGPDGEQTGEFSTLLN
PGCDPGPVKVHGLTVERLQGAPTFDQVAGRIGAMLQDRVLVAHNAQFDYDFLAHEFARAR
TWLPVSQRLCTLALNRQVDPPTGDMKLGTLAAHYGIPQQRAHDALDDTRVLAGILRASLR
EAAQLDLPLPLVACPPRAETQFTPKPPKAPCAYRNPGRLAPGEPLQQGMKVAITGETAHA
RAELVGRAVAAGLNMMTSVSRHTSVLVTNEPASDSAKARRALAEGVPVIDEHTFLRLLAD
VRPGTEHEATAVAVAPAAERQAEPVVGPMELAPATTSAAPVPEAAALPTVAPGAPVPAPR
RPEPSAGTLGKPLAGRRVLVLGGAHPDAAAARTRIVELGGSAAVNLSASVTDVVLLEGGQ
GDRRMRRITALGLPVHDHHWLTAPTATATAPAAAALRPQEPHVMPRGGVIDLPMPHGRPA
PEWYVTAGWAPQTDYEIDVVAFLLDDDEQVTCDEDLIFYGAPESPAGTARLLTGGPAEQS
IALNLASLPPATRKVVIAAAIDGAATFGTVGAIQVGAAPGSSGAPLARATLDAATTERTM
LLAEIYRRGPVWRLRAVGQGYDHGLDALARGYGVDIAE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcatcccgacctccttcgatgtgcccgccatgggcgactacgcctacgactgg
gccttggttgatgtggagacgtcgggactcatggcccggcgagaccgggtactgtccgtc
gcggtgatcacggtcggtccggacggtgagcagaccggggagttctcgacgctgctcaat
ccgggctgcgatccggggccggtgaaggtccacgggctgaccgtcgagcggctgcagggc
gcgccgacgttcgaccaggtcgccgggcggatcggagcgatgcttcaggaccgggttctg
gtcgcccacaatgcccagttcgactacgacttcctggcccacgagttcgcccgtgcgcgg
acgtggctgccggtgtcgcagcggctgtgcaccctggcgctgaatcgtcaggtggatccg
ccgaccggcgacatgaagctcggcaccctcgccgcccactacggcatcccccaacagcgt
gctcacgatgcgctggacgacacccgtgtactggccgggatcctgcgggcgtcactgcgc
gaggcagcgcagctcgatctgcccttgccgctggtggcctgcccgccccgggcagaaacg
cagttcacgccgaagccgccgaaggccccctgcgcctaccgcaatccgggacgtctggct
cccggcgagcctctccagcaggggatgaaggtcgcgatcaccggtgagaccgcccatgcc
cgggcggaactggtcgggcgggcggtcgccgccgggctgaacatgatgacctccgtcagc
cggcacaccagcgtgctggtcaccaatgaaccggcgtccgattcggcaaaggcccgacgc
gcactcgccgaaggcgtgccggtcatcgacgagcacaccttcctgcggctgttggccgac
gtacggccagggacggagcatgaggcgacggccgtcgctgtcgcccccgcggctgagcgg
caagccgaaccagtcgtcgggcccatggagttggcacccgccacaacctctgccgcaccc
gtcccggaagccgcggccctccccacggtcgcccctggtgcgccggtacccgcgccacgc
cggccggagccctccgccggcaccctcggcaagcctctggcggggcgtcgcgtgctggtg
ctcggtggtgcccatcccgatgccgcggcggctcgtacccgcatcgtcgagctgggcggg
tccgcggcggtcaacctgtcggccagtgtcaccgacgtcgtactcctggagggagggcag
ggtgaccggcgcatgcgccgcatcaccgccctcggactccccgtgcacgaccaccactgg
ctcaccgctccgaccgccaccgccaccgccccggccgcggcggcgctccggcctcaggag
ccgcatgtgatgccgagaggcggcgtcatcgacctgcccatgccgcacggcaggcccgcg
ccggagtggtatgtcaccgccggctgggccccgcagaccgactacgagatcgacgtcgtc
gccttcctcctcgacgatgacgaacaggtcacctgtgacgaggacctcatcttctacgga
gctccggagagccccgccggaaccgcgcgactgctgaccggcggccctgccgaacagagc
atcgccctcaacctggcatccctgccgcccgcgacgcgcaaggtcgtcatcgccgccgcc
atcgacggcgccgccaccttcgggacggtcggtgcgatccaggtcggtgccgcacccggg
agcagcggggcacctctcgcccgggcgactctggacgccgccaccaccgaacgcaccatg
ctgctcgcggagatctaccgcaggggcccggtctggcgcctgcgcgccgtcggccagggc
tacgaccacgggctggacgccctcgcacgtggatacggggtcgacatcgccgagtga
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