Streptomyces violaceusniger: Strvi_3504
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Entry
Strvi_3504 CDS
T01602
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_3504
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Strvi_3504
Archaeal homologous recombinant proteins
Strvi_3504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
FBPase_2
DUF7797
Motif
Other DBs
NCBI-ProteinID:
AEM83174
UniProt:
G2P3E6
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All DBs
Position
3676083..3677318
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AA seq
411 aa
AA seq
DB search
MRMLHTSDWHLGRSFHRVSLLAAQREFIDHLVTTVRERHIDAVVVAGDIYDRAVPPLAAV
ELFDDALHRLADLGVPTVMISGNHDSARRLGVGAGLIDRAGIHLRTDPAGCATPVVLSDD
HGEVAFYGLPYLEPGLVREELGASAAGHTAVLGAAMDRVRADLATRPSGTRSVVLAHAFV
TGGAVSDSERDITVGGVASVPADVFDGVDYAALGHLHGCQTITERIRYSGSPLAYSFSEA
AHRKSMWVVELEVAGEAPSCERVDCPVPRPLARIRGRIEGLLDDPDLDRHEEAWVEATLT
DAVRPHEPMARLARRFPHVLTLVFDPERPPEDPLASYAQRLRGRSDRQIAEDFVAHVRGG
RGPDEAERALLGDALEAVRSEAHEGVVPGEEHGAAATATARAGATAGEVAR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatgctgcacacctccgactggcacctcggacggtcctttcaccgggtcagcctc
cttgccgcgcaacgggagttcatcgaccacctcgtcaccaccgtgcgcgagcggcacatc
gacgcggtggtcgtcgccggtgacatctacgaccgggccgtgccgccgctcgccgccgtc
gagctcttcgacgacgccctgcaccggctcgcggacctcggcgtgcccacggtcatgatc
tccggcaaccatgactcggcccgccgtctcggcgtcggcgccgggctgatcgaccgggcc
gggatccacctgcgcaccgaccccgccggatgcgccacccccgtcgtcctctccgatgac
cacggcgaggtggccttctacggtctgccgtatctcgaacccgggctggtgcgcgaggag
ttgggcgcctccgcggccggtcatacggcggtgctgggcgccgccatggaccgggtgcgc
gccgacctcgccacccggccgtccggcacccggtccgtcgtcctcgcgcacgcgttcgtc
accggtggcgcggtcagcgacagcgagcgggacatcacggtcggcggagtcgcctccgta
cccgccgacgtcttcgacggcgtcgactacgccgcgctcggccatctccacggctgtcag
accatcaccgagcgcatccgctattcgggctccccgctcgcgtactccttctccgaggcg
gcgcaccgcaagtcaatgtgggtggtggagctggaggtggcgggcgaggcgccgtcgtgc
gaacgggtggactgcccggtgccgcgcccgctggcccggatccgcggccggatcgagggg
ctgctggacgacccggacctcgaccgccatgaggaggcgtgggtcgaggccacgctgacc
gacgcggtgcggccgcatgagccgatggcccggctggcgcggcgcttcccccacgtactc
acgctggtcttcgaccccgagcggccccccgaggatccgctcgcctcgtacgcacagcgg
ctgcgcggccgctcggaccggcagatcgccgaggacttcgtggcccatgtgcggggcggc
cgcggcccggacgaggcggagcgcgcgctgctcggcgacgcgctggaggccgtacggagc
gaggcgcacgagggggttgtgcccggtgaggagcacggcgcggcggcgaccgcgacggcg
agggccggggcgacggcgggggaggtggcgcgatga
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