Streptomyces violaceusniger: Strvi_3709
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Entry
Strvi_3709 CDS
T01602
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svl03000
]
Strvi_3709
Transcription factors [BR:
svl03000
]
Prokaryotic type
Helix-turn-helix
Other families
Strvi_3709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Sigma54_activ_2
HTH_50
AAA_16
AAA_22
nSTAND3
AAA
AAA_5
Sigma54_activat
HTH_23
HTH_7
HTH_30
HTH_22
DUF815
NACHT
RuvB_N
AAA_7
ABC_tran
Mg_chelatase
IstB_IS21
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AEM83374
UniProt:
G2NTL6
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Position
complement(3895179..3897008)
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AA seq
609 aa
AA seq
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MTTIDDTPADSALSSLRRARDRFLSGRPPGDGVPEDLAEAWRRARFFGVPRDLVALPRVR
PPEDSPLLAAARPALDRVAPTLSGEMGLVLVDSRCRALWSGGGRYTDPSADVAGLDLSEK
AVGHNSAALALRTGRRAEVHGPEHFLDLWQEVSAVSVPLYEPTAGRPAGTITVVAPLGEG
RTAHPGAAVAEATAHAVETELLGRARPPERVLLDAYLRQRADGAAVVSLDGSSRLVSPEA
ARLLSHETLARLERHATALLRDADAGPEGADAGPEDADAGPEGAHSGAPEEIAVPDGAGL
TVRMTRVVHGGEVVGAVATVCPARRARAAERPGPDRLPGLVGTSPPWRVAVSRATELARA
TEPLLLIGEPGVGKTALARALLGRRDTAAPRLVDAAEQVAGEVPRWCRALAEGDGGAPPL
LLRHAERLGQSDVAALLSLLEERPAVPLVATHTPGAPTGPCLSRLLDILSARSVTLPPLR
ERVEDIPALLAGLARRPSPGRPPLAWSLDARRALEQHTWPGNVTELAHVVREVAERRRAT
GPVRREELPYGLRVPPATRRLSGMERAERTAILEALRRHGDNKVRAAESLGIGRATLYRK
LRAYGMDQA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccatcgacgacacccccgccgactcggccctctcatccctgcgccgggcgcgc
gaccggttcctcagcggacggccaccgggcgacggcgtccccgaggacctcgccgaagcc
tggcggcgggcgcggttcttcggcgtaccgcgcgatctggtggccctgcccagggtccgg
ccgcccgaggattcaccgctgctggccgcggcgcgccccgcgctggaccgcgtggcgccc
acgctgagcggtgagatgggactggtgctggtcgactcccgctgccgcgcgctgtggtcg
ggcggcggccgttacaccgacccgtccgccgatgtggccggtctcgatctgtcggagaag
gcggtcgggcacaacagcgccgcgctcgcgctgcgcacggggcgccgggccgaggtccac
ggcccggagcacttcctcgacctgtggcaggaggtgtcggcggtcagcgtgccgctgtac
gagccgacggcgggccgcccggccggcaccatcaccgtggtggccccgctgggcgagggc
cgtaccgcccacccgggcgcggcggtcgccgaggccaccgcgcacgccgtcgagacggag
ctgctgggccgggcgcgcccgccggagcgggtgctgctcgacgcgtatctgcgtcagcgg
gccgacggggcggccgtggtgtcgctcgacggcagcagccgcctcgtcagcccggaggcc
gcgcggctgctgtcgcacgagacgctggcgcggctggaacggcacgccacggccctcctc
agggacgcggacgccggaccggaaggcgcggacgccggaccggaggacgcggacgccgga
ccggaaggcgcgcactccggggcaccggaggagatcgccgtaccggacggcgccgggctc
accgtgaggatgacgcgcgtggtgcacgggggcgaggtcgtcggggccgtcgccacggtg
tgcccggcccggcgggcgcgggcggcggaacggccgggccctgaccggctcccggggctc
gtgggcacgtccccgccctggcgggtggccgtctcccgggcgacggagctggcgcgggcc
acggagccactgctgctgatcggcgagccgggcgtgggcaagaccgcgctggcccgcgcc
ctgctcggccgccgggacacggccgcaccgcgtctggtcgacgccgccgagcaagtggcc
ggtgaggtcccgcgctggtgccgtgcgcttgcggagggggacgggggcgcaccgccgctg
cttctgcgccacgccgagcggctgggccagtccgatgtggccgcgctgctctcgctgctg
gaggagcgtcctgcggtgccgttggtggcgacgcataccccgggtgcgccgaccggtccg
tgtctgagccggctgctggacatcctctcggcccggtcggtgacgctgccgccgctgcgc
gagcgcgtcgaggacatcccggcgctgctggcgggcctcgcccggcgcccctcccccgga
cgtcccccgctggcctggagcctggacgcgcgccgggcgctggagcagcacacctggccg
ggcaatgtcaccgaactcgcccatgtcgtaagggaggtggccgagcgccgccgcgccacc
gggccggtgcggcgcgaggagctgccgtacggactgcgggtgccaccggccacccgccgc
ctgagtggcatggaacgggcggagcgcacggcgatcctggaggcgctgcgccgccacggg
gacaacaaggtgcgggccgccgagtccctgggcatcggccgggccacgctgtaccggaag
ctgcgggcgtacggaatggaccaggcgtag
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