Streptomyces violaceusniger: Strvi_3858
Help
Entry
Strvi_3858 CDS
T01602
Name
(GenBank) transcriptional regulator, DeoR family
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svl03000
]
Strvi_3858
Transcription factors [BR:
svl03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Strvi_3858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_AsnC-type
GntR
HTH_11
HTH_PafC
HTH_Mga
HTH_24
MarR_2
HVO_A0114
HVO_A0261_N
Dimerisation
MarR
Rrf2
Put_DNA-bind_N
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEM83520
UniProt:
G2PEN9
LinkDB
All DBs
Position
4102292..4103119
Genome browser
AA seq
275 aa
AA seq
DB search
MKVQSRCARGRVIDVKRPERWNALLDLLTRDGRIDVEEAAAELAVSAATIRRDLDELAQQ
QMLTRTRGGAVGQNLSYDLPLRYKTARRASEKQRIAAAAARMAEPGSIVGLNGGTTTTEV
ARAISLRGDLSAPGGGTAVTVVTNALNIASELAVRPQVKIVLTGGVARPQSFELMGPLAT
GVLGQVSLDLAILGVDALDTVQGATAHHEGEASINHLMAGRAARVVVVADSSKLGRRAFA
RICALEEIDVLITDTGADAELVAPYTEAGVRVIRA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtccagagccgatgtgcgcggggtagggtgatcgacgtgaaacggcccgagcgc
tggaacgccctgctggatctgctgaccagggacggcaggatcgatgtggaggaggcggcc
gccgagctggcggtgtccgccgcgaccatccgccgcgacctggatgagctcgctcagcag
cagatgctgacgcgtacccggggcggcgcggtcgggcagaacctctcgtacgaccttccg
ctgcgctacaagaccgcccggcgcgcctcggagaagcagcggatcgccgccgcggcggcc
cggatggccgaaccgggctcgatcgtgggtctcaacggcgggacgaccaccaccgaggtc
gcccgcgccatctccctgcgcggcgatctatccgccccgggcggcggcacggctgtcacg
gtcgtcaccaacgccctgaacatcgccagtgagctggcggtgcgcccccaggtcaagatc
gtgctcaccggcggggtcgcccgtccgcagtccttcgagctgatggggccgctggccacc
ggggtgctgggccaggtgtcgctggatctggcgatcctcggcgtggacgcgctggacacg
gtccagggcgcgaccgcccaccatgagggggaggccagcatcaaccacctcatggccggc
cgggcggcccgggtggtggtcgtggccgacagctccaagctgggccgccgggcgttcgcc
cggatctgcgcactcgaggagatcgatgtgctgatcacggacaccggcgccgatgcggag
ctggttgctccgtacaccgaggccggtgtccgcgtgatcagggcctga
DBGET
integrated database retrieval system
