Streptomyces violaceusniger: Strvi_4382
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Entry
Strvi_4382 CDS
T01602
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl00052
Galactose metabolism
svl00511
Other glycan degradation
svl00600
Sphingolipid metabolism
svl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Strvi_4382
09103 Lipid metabolism
00600 Sphingolipid metabolism
Strvi_4382
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Strvi_4382
Enzymes [BR:
svl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Strvi_4382
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
AEM84025
UniProt:
G2PF19
LinkDB
All DBs
Position
complement(4889629..4892685)
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AA seq
1018 aa
AA seq
DB search
MDPRPLHTPPMDPPPSDPPPLNPRPMDLRPWESPELTSWRRLSMHAVDRGAGALSLDDDH
WRFQLLPAPEVPPSEDWRHLKVPGAWTTQDTDDLPQYTNWRMPWPDIPPHSPAANPTGVH
ERDVDIPADWAGRRVILHVGAATSVLIAEVNGRAVGIGKDSHLASEFDITDAVRTGEANT
VRLTVVKWSDASHIEDQDHWWHGGITRPVLLYATDPLHLADVKITAPADGRLRVEVQVRH
ADGPLPAGWRVSGHLDGVGELTPDEEYAAWCVREDRVSDFLGEARLLATVPDVRRWSAET
PELYGLDIRLHRPDGSIADTSRHRVGFRTVEIVGNDLLINGERVFIRGVNRHDFHPLTGR
TVTPGDMRADLETIKRFGFNAVRTAHYPNDPALLDLADELGLYLVDEADIESHDHAHEIA
DDPRYLGAFVDRVSRMVLRDKNHACVIVWSLGNESDYGANHDAAAGWLRRYDPTRPLQYE
GAAKTDWSGADIASDILCPMYASLDEITAHAASGEQTKPLILCEYSHAMGNSNGTLADHW
AAIETTPGLQGGFIWEFWDHGILQRRATGRPAGPAASGAYAHGVAADGYRWAYGGDFGDV
PNDGAFCADGLVFPDRTPKPAMYEHREIAAPLRLTRSDPDRPPRVTNAQHFRDVSWLTAE
WRLSVEDGGTRTAPAVLPDLPPRASADLPLPHGLLAELPAAGAAGGGEAWLTLYVTTRHD
EPWAPRGTEVCAPQIQMRERSAPAPLAAVPVAMPVAVPVAVSGHSPGVDAEGLMRHPLLT
CPPALSLWRAPTDNDLLGGAADHWRALGLDRLVREPVSVDRTDGRVRVRSVYPTGAGPVE
HEQVFGLLNDDGLLIEETAVLPEGLTDVARVGTVFETVAGLNHLQWYGQGPWETYPDRRT
GGPVGHHRARVDSLFTPYLRPQESGGRSGVRRFALLSDTGTGLGVRLDAPRQVSVTRYRA
ADLAAASHHDELAPRPRCVVHLDAAHRGLGTASCGPDTLPRYRLGPGTYRWSWVLRPL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgtccgctgcatacgcccccgatggacccgcctccgtcggacccgcctcct
ctaaatccgcgcccgatggacctgcgtccctgggagtcgcccgagctcacctcctggcga
cggctgtcgatgcacgccgtggaccgcggggcgggcgctctttcgctggacgacgaccac
tggcgcttccagttgctgcccgcgccggaggtgcccccgtccgaggactggcggcatctg
aaggtgcccggcgcctggaccactcaggacaccgacgacctgccgcagtacaccaactgg
cgcatgccctggcccgacatcccgccgcactcccccgccgccaaccccaccggcgtacac
gagcgcgacgtcgacatcccggccgactgggccgggcgccgcgtcatcctgcacgtcggc
gccgcgaccagcgtgctgatcgccgaggtgaacggccgggccgtgggcatcggcaaggac
tcgcacctcgcgtccgagttcgacatcaccgacgcggtgcggaccggggaggccaacacc
gtacggctgaccgtggtcaagtggtccgacgcctcgcatatcgaggaccaggaccactgg
tggcacggcggcatcacccgccccgtcctcctctacgccaccgatccgctgcatctggcc
gacgtgaagatcaccgcccccgccgacggacggctgcgcgtggaggtccaggtgcgccac
gcggacgggccactgcccgcgggctggcgcgtgtccggacacctcgacggggtcggcgaa
ctcacccccgacgaggagtacgccgcctggtgtgtccgggaggaccgggtctcggacttc
ctcggcgaggcgcgcctcctcgccaccgtgcccgacgtacgccgctggtccgccgagacg
cccgagctgtacgggctcgacatccggctgcaccgccccgacggatccatcgccgacacc
tcccgccaccgcgtgggcttccgcaccgtcgagatcgtgggcaacgacctgctgatcaac
ggcgaacgcgtcttcatccggggcgtcaaccggcacgacttccacccgctcaccggccgc
accgtcaccccgggcgacatgcgtgccgacctggagaccatcaagcgcttcggcttcaac
gccgttcgcaccgcgcactacccgaacgaccccgcgctgctggacctcgccgacgagctg
ggcctctacctcgtcgacgaggccgacatcgaaagccacgaccacgcccacgagatcgcc
gacgaccctcgctatctgggcgcgttcgtggaccgggtctcgcgcatggtcctgcgggac
aagaaccacgcgtgcgtcatcgtgtggtcgctgggcaacgagagcgactacggcgcgaac
catgacgcggccgcgggctggctgcgccgctacgacccgacccgcccgctgcagtacgag
ggggcggccaagaccgactggtccggggcggacatcgcctccgacatcctctgcccgatg
tacgcgtcgctggacgagatcaccgcgcacgccgcctccggcgagcagaccaagccgctc
atcctgtgcgagtactcgcacgccatgggcaacagcaacggcaccctcgccgaccactgg
gcggccatcgagaccaccccgggtctccagggcggcttcatctgggagttctgggaccac
ggcatcctccagcgccgggccaccggccgccccgccggccctgccgcgtccggcgcctac
gcccacggggtggcggccgacggctaccgctgggcgtacggcggggacttcggagatgtg
ccgaacgacggcgcgttctgcgcggacggtctggtcttccccgaccgcaccccgaaaccc
gcgatgtacgagcaccgcgagatcgccgccccgctgcggctgacccggagcgatcctgac
cgcccgccgcgcgtcaccaacgcccagcacttccgcgatgtgtcctggctgacggccgag
tggcggctgtccgtcgaggacggcggcacccgcaccgccccggccgtactgcccgacctc
ccgcccagggcttcggcggacctgcccctgccccacgggctgctggccgaactgcccgcc
gcgggcgccgccggcggcggcgaggcatggctgacgctgtatgtgaccacgcgccacgac
gaaccctgggcgccgcgcggcaccgaggtgtgcgcaccccagatccagatgcgcgaacgg
tccgccccggcgccgctggcggcggtgccggtggcgatgcccgtggcggtgcccgtggcg
gtgtccggccactcccccggcgtcgacgcggaagggctgatgcgccatccgctgctgacc
tgcccgcccgccttgagcctgtggcgggcgcccaccgacaacgacctgctgggcggcgcc
gcggaccactggcgcgcgctgggcctcgaccggctcgtccgcgaacccgtctccgtcgac
cggacggacggccgcgtccgcgtgcgctccgtctacccgaccggcgccgggcccgtcgag
cacgagcaggtcttcggcctcctcaatgacgacggcctgctgatcgaggagaccgccgtc
ctccccgaggggctgaccgacgtcgcacgcgtgggcacggtcttcgagacggtggccggg
ctgaaccaccttcagtggtacggccagggcccctgggagacctacccggaccggcggacg
ggcggcccggtgggccaccaccgggcccgcgtggacagcctgttcaccccttatctgcgc
ccccaggagagcggcggccggtccggcgtacgccgcttcgcgctgctgtcggacaccggc
accggtctcggcgtgcggctggacgcgccccgccaggtctcggtcacccggtaccgcgcg
gccgacctcgcggccgcctcccaccacgacgagctggcccccaggccgcggtgcgtggtc
catctcgacgccgcccaccgtggcctcggcaccgcgtcctgcggcccggacacgctcccg
cgctaccggctgggccccggcacataccgctggtcatgggtgctgcgcccgctgtga
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