Streptomyces violaceusniger: Strvi_5956
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Entry
Strvi_5956 CDS
T01602
Name
(GenBank) glycoside hydrolase family 38
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Strvi_5956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svl04131
]
Strvi_5956
Enzymes [BR:
svl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
Strvi_5956
Membrane trafficking [BR:
svl04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
Strvi_5956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Ams1-like_1st
SCAN
Motif
Other DBs
NCBI-ProteinID:
AEM85463
UniProt:
G2PG84
LinkDB
All DBs
Position
complement(6839816..6842926)
Genome browser
AA seq
1036 aa
AA seq
DB search
MHDDRHAVEERIAKFIAERLRPALYGDRVPLEVAAWHLPGEPVPVADALRAEYRPFVTGG
SWGGPWSTTWFRATATVPERWAGRRVEALFDLGFDLSRGPGGQAEGLVHDADGTPLQGLH
PHNRSVPLTPRAIGGESVCLLVEAAANPPIVGSAGIGTHYGHRLTAGEEDLYQLRRADLV
VREEDVWQLIHDMEVLDELMRELPLGLPRRHEILRALQRAVDSVPPRRVAAGATAARAIL
RPVLDRRAHDTAHTVAAVGHAHIDSAWLWPLRETVRKCARTFSTMAGLAEEYPELVFACS
SAQSYAWMRDHQPYVFERIKKAVADGNWAPVGGMWVEADGNLPGGEALARQLVHGRRFFA
QELGVETDGVWLPDSFGYTAAYPQLAALAGARWFLTQKLSWNETNKLPHHTFWWEGIDGT
RIFTHFPPVDTCNATLSGAELAHAVATYAEKGAGTRSLAPFGYGDGGGGPTREMLEKARR
LADLEGSPRVSVQSPSDFFREAREEYPDAPVWRGELYLETHRGTYTSQARTKRGNRRSEA
LLREAELWAATAAVRTGEPYPYETLDALWKQVLLHQFHGILPGTSISWVHQQAEQTYRAV
HRGLERIVARAAGTPDTTEPLAVLNAAPHARREVVRLDAPPAAGGPVQKLSDGRYAVLAQ
APALGAAVLGTGTAHQARVTARPADAGGYVLDNGALTVHIDGDGLVRSAYDHDRRREAIA
PGGAGNLLQLHPDDPVRWSAWNLDAQYRNVHRDLDTATAVRLDDEGPLLACVRVERTTGR
SVVVQRLSLAADSRILEVDTDIDWREEDTVLKAAWPLDVHAERVASEIQFGHVERPTHEN
TSWDAARFEAWAHRWVHIGEHGWGAALLTDSTYGHDVARLTREDGGTTTTLRLTLLRGPH
SPDPHADRGRHRFRYALYPGADLGDAVAAGYAFSLPLRPAAPRLTGPPLVAVGDPGVVVE
AVKLADDRSGDVVVRLYESRGGRVRTTLAAGFAVDRVQVTDLLEHPTAELAHTQGVLDLT
LRPFQILTLRLARGAS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgaccgccacgccgtggaagagcgcatcgcgaagttcatcgccgagcgcctg
cgcccggcgctgtacggcgaccgcgtcccgctggaggtcgccgcctggcacctcccgggg
gagccggtgccggtggcggacgcgctgcgcgccgagtaccggccgttcgtcaccggtgga
agctggggcggcccgtggtcgaccacctggttccgcgccaccgccacggtccccgaacgg
tgggcgggccgccgggtggaggcactgttcgacctcggcttcgatctctcccgcggcccc
ggaggccaggccgagggcctggtccacgacgccgacggcaccccgctgcagggcctgcac
ccccacaaccgctcggtgccgctgaccccccgcgccatcggcggtgagagcgtgtgcctg
ctcgtggaggccgccgccaatccgcccatcgtcggcagcgcgggcatcggcacccactac
ggccaccggctcaccgcgggcgaggaggacctgtaccagttgcgccgtgccgacctcgtg
gtccgcgaggaggacgtctggcagctcatccacgacatggaggtgctggacgagctgatg
cgcgaactgcccctcggactgccgcgccgccacgagatcctgcgcgcgctccagcgggcc
gtggacagcgtgcccccgcgccgcgtcgccgcgggcgccacggcggcccgcgcgatcctg
cgcccggtcctggaccggcgcgcccacgacaccgcgcacaccgtcgccgccgtgggacac
gcccatatcgactccgcctggctgtggccgctgcgcgagaccgtgcgcaaatgcgcccgg
acgttctccaccatggccgggctggccgaggagtacccggagctggtcttcgcctgctcc
tccgcccagagttacgcctggatgcgtgaccaccagccgtacgtcttcgagcggatcaag
aaggcggtggccgacggcaactgggcgccggtcggcggcatgtgggtcgaggccgacggc
aatctgcccggcggagaggccctggcgcgccagctcgtccacggccgccgcttcttcgcc
caggagctcggcgtggagaccgacggcgtctggctgcccgactccttcggctacaccgcc
gcctacccgcagctcgccgcgctcgcgggcgcccgctggttcctcacccagaagctgtcc
tggaacgagaccaacaagctgccccaccacaccttctggtgggaggggatcgacggcacc
cggatcttcacccatttcccgcccgtggacacctgcaacgccacgctgtccggcgccgag
ctggcccacgccgtcgccacgtacgccgagaagggcgcgggcacccgctccctggccccc
ttcggctacggcgacggcgggggcgggccgacccgcgagatgctggagaaggcccggcgc
ctggccgatctcgaaggctccccgcgggtcagcgtccagtcgccgtcggacttcttccgt
gaggcccgcgaggagtaccccgacgcgcccgtgtggcgcggcgagctgtatctggagacc
caccgcggcacctacaccagccaggcccgcaccaagcgcggcaaccggcgcagcgaggcc
ctgttgcgcgaggccgagctgtgggcggcgactgccgccgtgcgcaccggcgagccctat
ccgtacgagacgctcgacgcgctgtggaagcaggtgctgctgcaccagttccacggcatc
ctgcccggcacctccatctcctgggtccaccagcaggccgagcagacctaccgcgccgtc
caccgcggcctggagcgcatcgtggcccgcgccgcgggcaccccggacaccacggaacca
ctcgccgtcctcaacgccgctccccacgcgcggcgcgaggtggtccgcctggatgcgccg
cccgccgccggcggcccggtgcagaagctgtccgacggccggtacgccgtactcgcccag
gcccccgcgctcggcgccgccgtcctcggcaccggcaccgcccaccaggcgcgggtcacc
gcccgtcccgccgacgcgggcggatatgtcctggacaacggcgcgctgacggtccatatc
gacggcgacgggctggtcaggtccgcgtacgaccacgaccgccgcagggaggccatcgcg
cccggtggcgccgggaacctgctgcagctccaccccgacgatccggtgcgctggagcgcc
tggaacctggacgcccagtaccgcaacgtccaccgcgacctggacaccgcgaccgccgtc
cggctcgacgacgagggcccgctgctggcctgtgtccgcgtggagcgcaccaccggccgg
tccgtcgtcgtgcagcgcctcagcctggccgcggacagccggatcctggaggtcgacacg
gacatcgactggcgggaggaggacaccgtcctcaaggccgcctggccgctggacgtgcat
gccgaacgcgtcgcgtccgagatccagttcggccatgtcgagcggcccacccacgagaac
acgagctgggacgccgcccgcttcgaggcgtgggcgcaccgctgggtccacatcggcgaa
cacggctggggcgcggccctgctcaccgactccacctacgggcacgacgtcgcccgcctc
acccgcgaggacggcggaacgaccacgaccctccggctcaccctgctgcgcggcccgcac
agccccgacccccatgccgaccgggggcggcaccgcttccgctacgcgctgtaccccggc
gccgacctcggcgacgccgtggccgcgggatacgccttcagcctcccgctgcgccccgcc
gcgccgcggctcaccggaccgccgctggtcgcggtgggcgatccgggcgtcgtggtggag
gcggtcaagctcgccgacgaccgctccggcgacgtcgtggtccggctctacgagtcgcga
ggcggccgggtccgcaccaccctggccgccggattcgccgtcgaccgcgtccaggtcacc
gacctcctggagcaccccacggccgaactggcgcacactcagggcgtgttggacctgacc
ttgcgcccgttccagatcctgaccctccggctggcgcgcggggcgtcgtga
DBGET
integrated database retrieval system
