KEGG   Streptomyces violaceusniger: Strvi_6521
Entry
Strvi_6521        CDS       T01602                                 
Name
(GenBank) DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
svl  Streptomyces violaceusniger
Pathway
svl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:svl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Strvi_6521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svl03400]
    Strvi_6521
DNA repair and recombination proteins [BR:svl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Strvi_6521
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AEM85929
UniProt: G2NVP5
LinkDB
Position
complement(7407381..7408310)
AA seq 309 aa
MRPVWSGAVTFGLVTISVKMYSATEDHSIRFRQIHLPDHGLIRNRKVCELDGQVLEQHEI
GRAYEASKDLLVPITDEDLDNLPLPTARAIDVQAFVPEDRLDAIRYDKPYYLEGDGAVAA
KPYVLLREALKRSDKVAIAKFAFRGRERLGALRVVEDAIALQVMHWDDEIRSAQGIAPSG
VDISDSEVDEAMALMDAIGPTDISQYRDQYREAMEAIIRAKTEGVELPHAEAPAEPKGKV
VDLMSALQDSVRAARKSRGEDTGDEAEVHEISRQRAPKKSTAKKTTAKKESGSGKKTAAK
KTSRKRPAS
NT seq 930 nt   +upstreamnt  +downstreamnt
atgcgtcccgtttggagtggagctgtcacctttggattggtgacgatttcagtgaaaatg
tactcagcgaccgaggatcactcgatccgattccggcagatccacttgcccgatcacggc
ctcatccgtaaccggaaggtgtgcgagctggacgggcaagtcctcgaacagcacgagatc
ggccgagcctacgaagcgtcgaaagacctgctcgtgcccatcaccgatgaggacctggac
aacctgccgctgcccacggctcgggctatcgacgtgcaggcattcgttcccgaggatcgg
cttgatgccatccgctacgacaagccgtactacctcgagggagacggcgccgtcgccgcc
aagccgtacgttctcctacgcgaagccctcaagcgcagcgacaaggtggccatcgccaaa
ttcgccttccgtggccgcgaacgcctcggcgcactgcgcgtcgtcgaggatgcgatcgcc
ctacaggtcatgcactgggacgacgaaatccgatccgcccaaggcatcgcacccagcggc
gtcgacatctccgactccgaagtggatgaggccatggccctcatggacgccatcggcccc
accgacatcagccagtaccgcgaccagtaccgcgaagccatggaagcgatcatcagagca
aagactgagggagtcgagctgcctcacgcggaggcgccggccgagccaaagggcaaggtc
gtagacctgatgtccgcgttgcaggacagtgtgcgggccgccaggaagagccgcggcgag
gacaccggcgacgaagccgaggtgcacgagatcagcaggcagcgggcgccgaagaagagc
accgcgaagaagaccaccgcgaagaaggagagcgggagcgggaagaagacggccgcgaag
aagacctcgaggaagaggcccgcgtcgtaa

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