Streptomyces violaceusniger: Strvi_6521
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Entry
Strvi_6521 CDS
T01602
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
svl
Streptomyces violaceusniger
Pathway
svl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Strvi_6521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_6521
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Strvi_6521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AEM85929
UniProt:
G2NVP5
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All DBs
Position
complement(7407381..7408310)
Genome browser
AA seq
309 aa
AA seq
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MRPVWSGAVTFGLVTISVKMYSATEDHSIRFRQIHLPDHGLIRNRKVCELDGQVLEQHEI
GRAYEASKDLLVPITDEDLDNLPLPTARAIDVQAFVPEDRLDAIRYDKPYYLEGDGAVAA
KPYVLLREALKRSDKVAIAKFAFRGRERLGALRVVEDAIALQVMHWDDEIRSAQGIAPSG
VDISDSEVDEAMALMDAIGPTDISQYRDQYREAMEAIIRAKTEGVELPHAEAPAEPKGKV
VDLMSALQDSVRAARKSRGEDTGDEAEVHEISRQRAPKKSTAKKTTAKKESGSGKKTAAK
KTSRKRPAS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccgtttggagtggagctgtcacctttggattggtgacgatttcagtgaaaatg
tactcagcgaccgaggatcactcgatccgattccggcagatccacttgcccgatcacggc
ctcatccgtaaccggaaggtgtgcgagctggacgggcaagtcctcgaacagcacgagatc
ggccgagcctacgaagcgtcgaaagacctgctcgtgcccatcaccgatgaggacctggac
aacctgccgctgcccacggctcgggctatcgacgtgcaggcattcgttcccgaggatcgg
cttgatgccatccgctacgacaagccgtactacctcgagggagacggcgccgtcgccgcc
aagccgtacgttctcctacgcgaagccctcaagcgcagcgacaaggtggccatcgccaaa
ttcgccttccgtggccgcgaacgcctcggcgcactgcgcgtcgtcgaggatgcgatcgcc
ctacaggtcatgcactgggacgacgaaatccgatccgcccaaggcatcgcacccagcggc
gtcgacatctccgactccgaagtggatgaggccatggccctcatggacgccatcggcccc
accgacatcagccagtaccgcgaccagtaccgcgaagccatggaagcgatcatcagagca
aagactgagggagtcgagctgcctcacgcggaggcgccggccgagccaaagggcaaggtc
gtagacctgatgtccgcgttgcaggacagtgtgcgggccgccaggaagagccgcggcgag
gacaccggcgacgaagccgaggtgcacgagatcagcaggcagcgggcgccgaagaagagc
accgcgaagaagaccaccgcgaagaaggagagcgggagcgggaagaagacggccgcgaag
aagacctcgaggaagaggcccgcgtcgtaa
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