Streptomyces violaceusniger: Strvi_6917
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Entry
Strvi_6917 CDS
T01602
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03030
DNA replication
svl03430
Mismatch repair
svl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Strvi_6917
03430 Mismatch repair
Strvi_6917
03440 Homologous recombination
Strvi_6917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svl03032
]
Strvi_6917
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_6917
Enzymes [BR:
svl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Strvi_6917
DNA replication proteins [BR:
svl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Strvi_6917
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Strvi_6917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AEM86293
UniProt:
G2P0S5
LinkDB
All DBs
Position
7926189..7927175
Genome browser
AA seq
328 aa
AA seq
DB search
MLEDPTTAAPHPAPPSSWPATYPQGYAVVDVETTGLARDDRIVSAAVYQLDARGAVQDHW
YTLVNPQRDPGPVWIHGLTEEVLEGAPRFPEIAGELAERLADRVLVAHNAAFDWSMLARE
YARSKSAAPVRQRLCTIALSKELGLPLPNHKLETLAAHYGVVQRRAHHALDDARVLAETF
RPSLHRAAETGLRLPLLACQPLTEWSDGPTIGRQRSYRQTWRPSRKRPACPYPNPGRYEP
GGQLVQGMRVAFSGDTSVDRELLEDRAIEAGLHVATSVSRLTSVLVTNDPDSPTSKTAKA
RSFGTPVIDEAAFMQLLQDVTPAPPTNR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccccacgacagccgcaccgcaccccgcaccgccgtcctcctggccggcc
acctatccgcagggttacgcggtcgtcgacgtggagaccaccggcctcgcccgcgacgac
cggatcgtctccgcggcggtctatcagctcgacgcccggggcgcggtgcaggaccactgg
tacacgctggtcaatccgcagcgcgatccgggcccggtgtggatccacggcctcaccgag
gaggtgctcgagggcgccccgcgcttccccgagatcgccggggagctcgccgagcgcctg
gccgaccgcgtcctggtcgcgcacaacgccgccttcgactggtcgatgctcgcccgggag
tacgcccgctccaagagcgccgcgccggtgcgtcagcggctgtgcaccatcgccctctcc
aaggagctgggcctgccgctgcccaaccacaagctggagactctcgccgcgcactacgga
gtggtccagcggcgcgcccaccacgccctggacgacgcgcgggtgctcgccgagaccttc
cggcccagcctccaccgggccgccgagaccgggctgcgcctgccgctgctggcctgccag
ccgctcaccgagtggtccgacggcccgacgatcggccgccagcgctcgtaccggcagacc
tggcggcccagccgcaagcgccccgcctgcccctaccccaaccccgggcggtacgagccg
ggcgggcagctcgtccagggcatgcgggtggcgttctccggggatacctccgtcgaccgc
gagctgctggaggaccgggcgatcgaggccgggctgcacgtggccaccagcgtctcccgg
ctcaccagcgtgctggtcaccaacgaccccgactcgcccacgtccaagaccgccaaggcc
cgctccttcggcacgcccgtcatcgacgaggcggccttcatgcagctcctccaggacgtc
accccagcgccgccgacaaacaggtga
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