Streptomyces violaceusniger: Strvi_7635
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Entry
Strvi_7635 CDS
T01602
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
svl
Streptomyces violaceusniger
Pathway
svl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Strvi_7635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svl03021
]
Strvi_7635
Transcription machinery [BR:
svl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Strvi_7635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
AEM86971
UniProt:
G2NWL4
LinkDB
All DBs
Position
complement(8696862..8698106)
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AA seq
414 aa
AA seq
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MQTQTLTDAALAASPHPVSARPPGAAPVAPAVPEDPADLAPEGVPETDQDAAPDAMADVA
ADPDPDGAPEAESAEPAEPAEPAEPVEPVESVDTVVEPVEPIEPPARADTSGPSADLFRQ
YLREIGRIPLLSAVEEVELARRVEAGLFAEEKLGNTPDLDSQLAVDLDRLVVLGRVAKRR
LIEANLRLVVSVAKRYIGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQA
MSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAAHLDLLPERVSEVL
RLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLLREHLEAVLSTLGERERKV
VQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagaccctcaccgacgcggccctcgcggcgtcgccgcaccccgtgtccgcc
cgcccgcccggcgccgcaccggtagcgccggccgtgcccgaggacccggcggacctcgcc
ccggagggtgtaccggagaccgaccaggacgccgcaccggacgccatggccgacgtggct
gccgaccccgaccccgacggcgcccccgaggcggaatccgccgagcccgccgagcccgcc
gagcccgccgagccggtcgagcccgtcgagagcgtggataccgtcgtagagcccgtagaa
ccgatcgagccgcccgcccgcgccgacaccagcggcccctccgccgatctcttccgccag
tacctccgcgagatcgggcggataccgctgctctccgcggtcgaggaggtcgagctggcc
cgccgggtcgaggcgggtctcttcgccgaggagaagctcggcaacacccccgacctcgac
tcccaactcgccgtggacctcgaccggttggtggtcctgggccgggtggccaagcgccgg
ctgatcgaggccaacctccgcctcgtcgtctccgtcgccaagcgctatatcggccgcggc
ctgaccatgctcgacctggtccaggagggcaacctcggcctgatccgcgcggtcgagaag
ttcgactacgcccgcgggtacaagttctcgacgtacgcgacctggtggatccgccaggcc
atgtcccgcgccctggccgaccaggcccggacgatccgggtcccggtgcatgtcgtcgaa
ctgatcaaccgggtggtccgggtccagcgccggatgctccaggagcgcggctacgaaccc
acccccgaggaggtcgccgcccatctcgacctcctcccggagcgggtgagcgaggtgctg
cggctggcccaggagccggtgtcgctccacgccccggtgggcgaggaggacgatgtggcc
ctcggcgacctcatcgaggacggcgacgcggcctcacccgtggagtccgcggccttcctg
ctgctccgcgagcacctggaggccgtgctgtcgacgctcggcgagcgcgaacgcaaggtg
gtgcagttgcggtacggactggccgacggccgcccccgcacgctggaggagatcggccgg
atcttcggggtgacgcgggagcggatccgccagatcgagtcgaagacgctcaacaagctc
cgcgaccacgccttcgccgatcagctccgcggctacctggactag
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