Streptomyces violaceusniger: Strvi_8030
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Entry
Strvi_8030 CDS
T01602
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Strvi_8030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svl03400
]
Strvi_8030
Enzymes [BR:
svl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Strvi_8030
DNA repair and recombination proteins [BR:
svl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Strvi_8030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
NAT10_TcmA_helicase
NPHP3_N
PhoH
AAA_16
PIF1
TraI_hel_assoc_N
nSTAND3
AAA
DEAD
UvrD-helicase
HTH_IclR
TrwB_AAD_bind
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AEM87353
UniProt:
G2P7P1
LinkDB
All DBs
Position
complement(9263184..9265427)
Genome browser
AA seq
747 aa
AA seq
DB search
MLKLAVVEGVLERITYANEENGYTVARVDTGRGSGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGKQFTVENYQTVLPATVQGIRRYLGSGLIKGIGPRIADRITEHFGVDTLDVIEER
PERLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVV
KNEPYRLAADVWGIGFLTADKIAQSVGIPHDSPDRVKAGLQYALSQSADQGHCYLPEEQL
IADAVKLLQVDTGLVIDCLGELAAEDEGVVREPVPGPEAGEPVSAVYLVPFHRAEISLAG
QVLRLLRTQEDRLPAFGDVDWDKALGWLASRTGADLAPEQSQAVRLALTEKVAVLTGGPG
CGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELRPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDLLAP
GSPVPAVRLTRIFRQAQQSGVVTNAHRINEGVPPVTQGLSDFFLFVEDDTEEAGRLTVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPARPDLPERRLGGRVFRV
GDKVTQIRNNYEKGANGVFNGTVGVVTSLDTDEQRLIVRTDEDEEVPYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRALGQAVRTVS
AGRRCTALDHRLGGDVTVERVKRVSER
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactcgcggtggtcgaaggggtcctggagcggatcacctacgccaatgaggag
aacggctatacggtcgcgcgggtcgacaccggccgtggctccggcgatctgctgaccgtg
gtcggctcgctgctgggcgcccagccgggcgagtcactgcggatggagggccgctggggt
tcccatccgcaatatggcaaacagttcacggtcgagaactaccagaccgtcctccccgcc
accgtccagggcatccggcgctatctcggctcggggctgatcaagggcatcggcccccgg
atcgccgaccggatcaccgagcacttcggcgtcgacaccctcgatgtcatcgaggagcgg
cccgagcggctggtcgaggtcccgggcctcggccccaagcgcaccaagatgatcgccgcc
gcctgggaggagcagaaggccatcaaggaggtgatggtcttcctccagggggtgggcgtc
tccacctccatcgcggtgcggatctacaagaagtacggtgacgcgtcgatttcggttgtg
aagaacgagccgtaccggctggcggccgacgtctggggcatcggcttcctcaccgccgac
aagatcgcccagtcggtgggcattccgcatgacagccccgaccgggtgaaggccggtctg
cagtacgcgctgtcccagtccgccgaccagggccactgctatctccccgaggagcaactc
atcgcggacgcggtgaagttgctccaggtggataccggtctggtcatcgactgtctgggg
gagctggcggccgaggacgagggcgtggtgcgcgagccggtcccgggcccggaggccggc
gagccggtctccgccgtctatctggtgcccttccatcgcgccgagatctccctcgccggc
caggtgctgcggctgctgcgcacccaggaggaccggctgcccgccttcggggatgtggac
tgggacaaggcgctgggctggctggcgagccgcaccggggccgatctggcgcccgagcag
agccaggcggtgcggctcgcgctgaccgagaaggtcgcggtgctcaccggcgggccgggc
tgcggcaagtccttcaccgtgcggtccgtggtggagctggcccgcgccaagaaggcgaag
gtggtgctcgcggcgcccaccggccgggccgccaagcggctgtccgagctgaccggcgcc
gaggcgtccaccgtccaccggctgctggagctgaggcccggcggggacgcggcgtacgac
agggaccgcccgctcgacgcggatctggtggtggtcgacgaggcgtcgatgctcgatctg
ctgctggccaacaagctggtcaaggcggtcccgcccggtgcccatctgcttttcgtcggg
gatgtggaccagttgcccagcgtgggcgccggggaggtgctgcgcgatctgctggccccc
ggcagccccgtccccgcggtgcggctgacccggatcttccgccaggcccagcagtccggg
gtggtcaccaacgcccaccggatcaacgagggggtgccgccggtcacccagggcctgtcg
gatttctttctcttcgtcgaggacgacaccgaggaggccgggcggctcacggtcgatgtc
gcggcccgccgcatccccgccaagttcggcctcgacccccgccgtgacgtgcaggttctg
gccccgatgcaccgcggcccggcgggcgcgggcacgctcaacggactgcttcagcaggcc
atcaccccggcccgcccggacctcccggagcgccgcctcggcggccgggtctttcgagtc
ggcgacaaggtgacccagatccgtaacaattatgagaaaggggccaacggggtcttcaac
ggcacggttggcgtcgtcacctcactcgacaccgatgagcagcggctgatcgtgcggacg
gacgaggacgaggaggtaccgtacgacttcgacgagctggacgagctggctcatgcctat
gcggtgaccatccaccggtcacagggcagtgagtacccggccgtcgtgattccggtgacc
accggggcctggatgatgctgcagcgcaacctcctgtacacggcggtgacccgtgccaag
cgccttgtggtgctggtcggctcgcgccgtgcgctggggcaggcggtgcgcaccgtctcg
gcggggaggcgctgtaccgcgctggatcaccgactcggcggcgatgtgacagtcgagcgt
gtcaagagggtttccgaacgatga
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