Streptomyces violaceusniger: Strvi_8452
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Entry
Strvi_8452 CDS
T01602
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svl03021
]
Strvi_8452
Transcription machinery [BR:
svl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Strvi_8452
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
HTH_3
HTH_24
HTH_10
DUF7343
MarR
HTH_Crp_2
HTH_20
GerE
Sigma70_ECF
HTH_37
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AEM87766
UniProt:
G2PAP0
LinkDB
All DBs
Position
9746826..9747773
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AA seq
315 aa
AA seq
DB search
MSPRLDDTRTEPSGSTRTTVSSAPLPEQFTPDADAQATVGHLFDELPELSDLPEIPPYDT
VAPVDARALSKTLFERLEVLEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIV
QVGTIGLIKAIDRFETGRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAK
AGDELAQRLDRAPTVSELAQRLDISQSEVVEGMAASNAYTASSLDAQPEEDDSEGALADR
IGYEDHGLEGIEYVESLKPLIADLSARDRKILSLRFVANMTQSEIGEELGISQMHVSRLL
SRTLRRLRKGLMIEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccgccttgacgacacgcgtaccgaaccctcggggagtactcggaccaccgtt
tcgtcggcccccctgcccgagcagttcactcccgacgcggacgcccaggcgaccgttggc
cacctcttcgacgaactgccggaattgtccgatctgccggaaatacctccttatgacacg
gtagcaccggtggacgcgagggctctgtcgaagacccttttcgagcgtctcgaggtgctg
gaggaaggcacccacgaatacgcctatgtgcgtaacaccctggtcgagctcaacttggcg
ctggtcaagttcgccgcctcccggttccgctcccgcagcgagccgatggaggacatcgtc
caggtcggcaccatcggcctgatcaaggccatcgaccgcttcgagaccggccggggcgtc
gagttcccgaccttcgcgatgccgacgatcgtcggtgagatcaagcgattcttccgcgac
acgagctggtcggtgcgcgtaccgcggcggctgcaggagctccgtctcgacctggccaag
gccggcgacgaactcgcccagcggctggaccgcgcccccaccgtcagcgagctggcccag
cggctggacatcagccagtccgaggtcgtcgagggcatggccgcgagcaacgcgtacacc
gcgagctcgctggacgcccagccggaggaggacgactccgagggagcgctggcggaccgg
atcggctacgaggaccacgggctcgaaggcatcgagtacgtcgagtccctgaagccgctg
atcgccgatctgtccgcgcgcgaccggaagatcctctccctgcgcttcgtggcgaatatg
acgcagtcggagatcggtgaggagctgggcatctcccagatgcatgtctcgcggctgctg
tcgcgcaccctccgtcggctccgtaagggtctgatgatcgaggagtga
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