Streptomyces violaceusniger: Strvi_8754
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Entry
Strvi_8754 CDS
T01602
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
svl
Streptomyces violaceusniger
Pathway
svl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Strvi_8754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svl03019
]
Strvi_8754
03110 Chaperones and folding catalysts [BR:
svl03110
]
Strvi_8754
03029 Mitochondrial biogenesis [BR:
svl03029
]
Strvi_8754
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svl04147
]
Strvi_8754
Enzymes [BR:
svl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Strvi_8754
Messenger RNA biogenesis [BR:
svl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Strvi_8754
Chaperones and folding catalysts [BR:
svl03110
]
Heat shock proteins
HSP60 / Chaperonin
Strvi_8754
Mitochondrial biogenesis [BR:
svl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Strvi_8754
Exosome [BR:
svl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Strvi_8754
Exosomal proteins of other body fluids (saliva and urine)
Strvi_8754
Exosomal proteins of breast cancer cells
Strvi_8754
Exosomal proteins of colorectal cancer cells
Strvi_8754
Exosomal proteins of bladder cancer cells
Strvi_8754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEM88058
UniProt:
G2P9G4
LinkDB
All DBs
Position
complement(10105052..10106677)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAQLLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISPYFATDMERMEASLDDPYILIVNSKISSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGVDLLGRARKVTVTKDETTIVDGAGDTDQVQGRVNQIRAEIESSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQT
VSIFEKLELEGDEATGAQAVRLALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAPAGAPGGMPGGDMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcaccctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacg
gacgacgtcgccggtgacggcacgacgaccgcgaccgtcctcgcccaggcgctggtcaag
gagggcctccgcaacgtcgccgcgggtgccaacccgatggcgctcaagcggggtatcgag
aaggccgtcgaggccgtctccgcccagcttctcgagcaggccaaggacgtggagaccaag
gagcagatcgcctccaccgcctccatctccgccgccgacacccagatcggcgaactcatc
gccgaggcgatggacaaggtcggcaaggaaggtgtcatcaccgtcgaggagtcgcagacc
ttcgggctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccccg
tacttcgcgacggacatggagcgtatggaggcgtcgctcgacgacccgtacatcctgatc
gtcaactcgaagatcagtagcgtgaaggacctccttccgctgctcgagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggcgaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgtaaggccatgctcggtgacatcgccatccttaccggtggcaccgtcatctcc
gaggaggtcggcctcaagctggagaacgccggggtggacctgctcggccgcgcccgtaag
gtcaccgtcaccaaggacgagaccaccatcgtggacggcgccggcgacaccgaccaggtg
cagggccgcgtcaaccagatccgcgccgagatcgagtcctcggactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcagacc
gtctcgatcttcgagaagctggagctcgagggcgacgaggccaccggtgcccaggccgtg
cgcctggccctggaggccccgctgaagcagatcgcggtcaacgccggtctcgagggcggc
gtcgtggtcgagaaggtgcgcaacctgaccccgggccacggcctcaacgccgcgaccggt
gagtacgtcgacctgatcgccgagggcatcatcgacccggccaaggtcacgcgctccgcg
ctgcagaacgccgcgtcgatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccccggcgggcgctccgggcggcatgccgggcggtgacatggac
ttctga
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integrated database retrieval system
