Streptomyces violaceusniger: Strvi_8949
Help
Entry
Strvi_8949 CDS
T01602
Name
(GenBank) RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svl03021
]
Strvi_8949
Transcription machinery [BR:
svl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Strvi_8949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
DUF7343
MarR_2
Sigma70_ECF
HTH_10
KORA
HTH_37
MarR
HTH_3
GntR
Motif
Other DBs
NCBI-ProteinID:
AEM88250
UniProt:
G2P1S2
LinkDB
All DBs
Position
complement(10347497..10348420)
Genome browser
AA seq
307 aa
AA seq
DB search
MNDTATVTMSTLTAAEAEQARGGQVRDIALNGVETAGPSDLPTVDDPAKVAPKDARVLTK
TFLDRLTELEEGTHEYQYVRNTLIELNLSLVRYAARRFHNRSVEMEDIVQVGTIGLIKAI
DRFDLSREVEFTTFAVPYIVGEIKRFFRDTSWAVHVPRRLQELRIDLAKANEELFQRLDR
SPTTAELAEHLQLSEDEVVDGLVASNGYLTSSLDAPAEQESGATRVTTYADRFGDVDPAM
EAVENLHALKPLVEELGERDRRILQLRFGEEMTQSEIGAELGVSQMHVSRLLSRALSRLR
RGMLAEE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacacggcaaccgtgacaatgtcgacactgacggcagccgaagctgagcaagca
cgtggtggccaggtacgtgacattgcactcaatggagttgagaccgccggaccgtccgat
ctgcccacggtggacgatccggcaaaggtggcgcccaaggacgcgagggtactgaccaag
acgttcctggaccggctgacggagctggaggaggggacgcacgagtaccagtacgtgcgg
aacaccctcatcgagctcaacctgtcgctggtccggtacgccgcccggcggttccacaac
cgctcggtggagatggaggacatcgtccaggtcggcaccatcgggctgatcaaggcgatc
gaccggttcgacctgagccgcgaggtcgagttcaccaccttcgccgttccgtacatcgtc
ggcgagatcaagcggttcttccgcgacaccagctgggcggtgcatgttccccgccgtctg
caggagttgcggatcgatctcgccaaggcgaacgaggagctgttccagcggctggaccgg
tcgcccaccacggccgagctcgcggagcacctgcagctgagcgaggacgaggtcgtcgac
ggactggtggccagcaacggctacctcaccagttcactggacgcgcccgccgagcaggag
agcggggccacgcgtgtcaccacgtacgcggaccggttcggcgacgtcgacccggccatg
gaggccgtggagaatctgcacgcgctcaagccgctggtggaagagctcggtgagcgggac
cgccgcattctgcagctgaggttcggcgaggagatgacgcagtcggagatcggcgccgaa
ctcggcgtctcccagatgcatgtctcccggctgctcagccgcgcgctgagccggctgcgg
cgcggaatgctcgccgaggagtag
DBGET
integrated database retrieval system
