KEGG   Shewanella vesiculosa: KDH10_000104
Entry
KDH10_000104      CDS       T08322                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
svm  Shewanella vesiculosa
Pathway
svm00521  Streptomycin biosynthesis
svm00523  Polyketide sugar unit biosynthesis
svm00525  Acarbose and validamycin biosynthesis
svm00541  Biosynthesis of various nucleotide sugars
svm01100  Metabolic pathways
svm01110  Biosynthesis of secondary metabolites
svm01250  Biosynthesis of nucleotide sugars
Module
svm_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:svm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    KDH10_000104 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    KDH10_000104 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    KDH10_000104 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    KDH10_000104 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    KDH10_000104 (rfbB)
Enzymes [BR:svm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     KDH10_000104 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short Sacchrp_dh_NADP KR NAD_binding_10
Other DBs
NCBI-ProteinID: UJL42934
LinkDB
Position
116773..117858
AA seq 361 aa
MNILVTGGAGFIGSALVRHIINNTQDSVINVDKLTYAGNLESLASIASSDRYVFEQVDIC
DRAELARVFKQHQPDAVMHLAAESHVDRSITGPSDFIQTNIVGTYTLLEATRDYWNTLSV
DAKQAFRFHHISTDEVYGDLPHPDEQEGLAVNQELPLFTEITSYAPSSPYSASKASSDHL
VRSWLRTYGLPTIITNGSNNYGPYQFPEKLIPLIIMNALEGKLLPIYGKGDQIRDWLYVE
DHARALYKVVTQGKVGETYNIGGHNEKRNIEVVQAICSILDTLVPTDTLYAEQITYVTDR
PGHDRRYAIDASKMSNELNWQPQETFETGLRKTIEWYLINPAWCQHVQDGSYQHERLCID
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaatattttagtcaccggtggtgcaggttttattggctctgcattagtacgccatatc
atcaataacactcaagatagcgtcattaatgttgataaattgacctatgcaggtaatctt
gaatcgttagcgagtatagcgtcaagtgatcgatatgtgttcgaacaagtcgatatttgt
gaccgtgcagaattagctcgagtgtttaaacaacaccagccagatgcagtgatgcattta
gcggcagagtctcatgttgatcgttctattaccggaccatctgactttatacaaaccaac
atagttggcacttatacgttacttgaagcgacgagagattactggaataccttatctgta
gatgccaagcaagcctttcgttttcatcatatatctacagatgaagtatacggtgattta
cctcatcctgatgagcaagaaggcctagcagtaaatcaagagttgccgttatttactgaa
attacctcgtatgcaccaagtagcccttattcagcatctaaagcatcaagtgaccactta
gtcagatcgtggttgcgcacatacggtttaccaaccattatcactaacggctcaaacaac
tacggtccataccagtttccagagaagttgatcccattaattattatgaatgcgttagag
ggtaaattattgcccatttatggtaaaggtgatcaaattcgtgattggctctatgtagaa
gaccatgctcgtgcactttataaagtggtaacacaaggtaaagtcggtgagacttataat
atcggcggacataacgaaaaacgaaatattgaagtggtacaggctatttgcagtatttta
gacaccctagtgcctacagacactttatacgctgagcaaatcacttatgttacagaccgt
cctggacatgaccgtcgttatgcaattgatgcaagtaaaatgagcaatgagcttaactgg
caaccacaagaaacatttgagacaggcttacgtaaaaccattgagtggtatttaataaac
ccagcttggtgccaacatgtacaggatggttcataccaacacgaacgtttatgcatagat
gcttga

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