Shewanella vesiculosa: KDH10_000144
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Entry
KDH10_000144 CDS
T08322
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00730
Thiamine metabolism
svm01100
Metabolic pathways
svm01240
Biosynthesis of cofactors
svm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KDH10_000144 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
KDH10_000144 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svm03016
]
KDH10_000144 (thiI)
Enzymes [BR:
svm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
KDH10_000144 (thiI)
Transfer RNA biogenesis [BR:
svm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
KDH10_000144 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
ThiI_fer
Rhodanese
GTP-eEF1A_C
Motif
Other DBs
NCBI-ProteinID:
UJL42968
LinkDB
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Position
170921..172375
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AA seq
484 aa
AA seq
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MKFIVKLYPEIMMKSKSVRVRFTKMLETNIRNVLKNVDEGAKVLRQYDRIVVKVPIDKPE
LCDAFADRLSCIPGIAHIVQVSEYSFDSIDHIYQQTLPIYRDEIAGKTFCVRVKRSGKHD
FNSIDVERYVGGGLNQHTDALGVKLKNPDVTVNLEIDQDKLYMVERRIEGLGGFPMATQE
DVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKKYGESHKVR
FISVPFEPVVEEILERIDNGQMGVVLKRVMMRAATRIADKFGIQALVTGESLGQVSSQTL
TNLNVIDRSTELLILRPLITMDKQDIINQSRIIGTEDFAKSIPEYCGVISQKPTVKAILS
KVEAEEMKFSEDLIERVVASAVVMDIRDIEAEMNQQVTETETVNNVASGEIIIDVRAPEE
EERSPLLIDNVMIKAIPFFKLATQFADLDKSKTYLLYCDRGVMSKLQALYLVEQGYTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattgtaaagctgtaccctgaaatcatgatgaagagcaagtctgtaagagtg
cgctttactaagatgctcgaaaccaatatccgtaatgtactaaaaaacgtcgatgaaggt
gccaaagttctgcgtcaatacgatcgtattgtagtcaaggtaccaattgataaaccggaa
ttgtgtgatgcatttgcagaccgattatcttgcattccaggtattgctcatatcgtacag
gtcagtgaatacagctttgattctattgatcatatttaccagcaaacattaccaatatac
cgtgacgaaattgccggtaaaacattttgtgttcgcgtaaaacgttctggtaagcatgat
tttaactcaattgatgttgagcgatatgtgggtggcggattaaatcagcatacggatgca
ctaggggtaaaacttaaaaatccagatgtgactgttaatcttgaaatcgatcaagataag
ctttacatggtcgagcgccgtatagaaggtttgggtggtttcccaatggcaacccaagaa
gatgtgttgtcgcttatttcgggtggtttcgattctggtgtatcaagttttcagtttatt
aagaaaggtgcgcgtacccattattgtttctttaatctaggtggcgctcagcacgagata
ggtgttaagcaggtggcttatcatttatggaaaaaatatggtgagtcgcataaagtacgt
tttatctctgtgccatttgagcctgttgttgaagagattcttgagcgcattgataatggt
caaatgggcgtagtacttaagcgtgtaatgatgcgagctgctactcgtatcgctgacaaa
tttggtattcaagccttagttaccggagaaagcttaggacaagtttctagccaaacactg
actaacttaaatgtgattgatcggagtactgagttactgattttacgcccgctgatcaca
atggataaacaagatattattaatcagagccgtattattggcactgaagattttgcgaag
tcgattcctgagtattgtggggttatttcacaaaagcctacagttaaagcgatattgtct
aaggttgaagccgaagagatgaaattctccgaagacttaatcgaacgggtggttgcatct
gctgtcgtgatggatattcgtgatatagaggctgaaatgaatcaacaagttaccgagacc
gaaacggttaacaatgtggcatcaggtgagattatcattgatgttcgcgctccagaagaa
gaagagcgaagcccattattgatcgataatgtgatgattaaagcgattccattctttaaa
ttagcgacacaatttgctgacttagataagtctaaaacgtatttattgtattgtgaccgt
ggggttatgagtaaattgcaggctttataccttgttgagcaaggctatacgaacgttaaa
gtgtatcgcccttaa
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