Shewanella vesiculosa: KDH10_000146
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Entry
KDH10_000146 CDS
T08322
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svm03000
]
KDH10_000146
Transcription factors [BR:
svm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KDH10_000146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UJL42970
LinkDB
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Position
172945..173856
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AA seq
303 aa
AA seq
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MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFIELGEATNRLLARSAVGSLTVSMSPSFAIQWLVPRLAKFSEKN
PDIDVRIKAVDSDASSLTDDVDVAIYYGQGNWPGLRADKLRNEVLIPVCSPLLLNGPKPL
TLPSDLKFHTLLHDSNRQDWQAWFRQCGVTDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFSEVLVSKDAYYLVCQQNHSEIGKISAFREWMVDMFAEESRSEL
LTG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgattacctcctttgaatgcagttaaagcatttgaagctgcagcaagacat
ttgagctttacccgcgctgcagaagagttgtttgtcactcaagctgctgtgagtcatcaa
attaaggcgttagaagattttttagggctaaagctgtttagacgtaaaaatagatcatta
ttgttaacagaagagggccaaagctattttctggacattaaagatatttttattgagcta
ggagaagcgacaaatcgcttgcttgctcgtagtgccgtcggttcgttaactgtgagtatg
tcaccgagttttgcgatccaatggttagtgccgcgtttagctaaatttagtgaaaaaaat
cctgatattgatgtgcgtatcaaagcggtagacagtgatgcaagttcgttaactgatgat
gtagatgtcgctatttattatggtcaaggaaattggccgggtttacgtgcagacaaattg
cgtaatgaagtgcttattccggtatgttcgccactcttactcaatggtcctaagccacta
acgctaccgagcgatttgaagtttcataccctactgcacgactctaaccgtcaggattgg
caggcatggtttaggcaatgtggcgtgacagatattaatgtcaatcaagggccgatattt
agccattcttcattggtattgcaagctgcagcgcatggccagggagttgctttaggttat
agcgtacttgctcggccagacattaaagcggggcgcttagtgtgtccgttttctgaagta
ttggttagcaaagatgcctattacttagtctgccaacaaaaccattctgaaataggcaaa
atttcagcctttagagagtggatggtggacatgtttgcagaggagtctcgaagtgaactg
cttaccggataa
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