Shewanella vesiculosa: KDH10_000338
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Entry
KDH10_000338 CDS
T08322
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svm02000
]
KDH10_000338
Transporters [BR:
svm02000
]
Other transporters
Pores ion channels [TC:
1
]
KDH10_000338
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UJL43110
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Position
390712..393315
Genome browser
AA seq
867 aa
AA seq
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MHKNVLAKSVRLALISGAAAAAFASPAVFAADEDGAKVERIEVTGSRIKRSDLEGASPIT
TITTEDMKMEGNFTVADALRNSNLNSFGSFSERSGSSAQSQATIDLRGAGSSRTLVLIDG
KRFPGSPTLGGASANLNAIPMAAVERIDILTDGASSTYGSDAIAGVVNIIMKKNYQGIEF
NVGGGSRDQDGGLTSKEFSVVAGYQMDKGNITFSFDHQDRKGISDADRPYTAASMTDFNG
DGEIQAYEETSGWSIYGATVAAPDFSTAQASLLCNDLEAQYGSDVFQTVKADNDWGGAGS
TYCMYAFANVSYNKASTERNTVYVDANYEIAEDIEWFGRVMVTAGNSFGRYAPPAAAWNS
MAADNPHNPYGEETTGYFRWVGIGTRDGNVDDYNQDYLTGLRGTISALNDAEWEFYYHHN
IADNKSIGEYYLSYAGLAYNQANDIDLGSEAGINNMKTTTLTQGRATFDQYSAGIGFDAF
ELPGGAVAHYVGMEYFDQQYSEVYDAQSEAGLVGGSAGNSAGGDRQVWAMFYEAVLPLTD
DIELNLAARYDDYSDFGDNVAPKASVRWQALDNVVVRASYSEAFRAPSLDQLYAATTFSA
DTGTDYPFCESAGISDADCSSKQYDTYIRANDSLGPETSKYTNLGVAWDIVDDIGVKVDY
FNLKIDDVISRRTITNVMRGITLAENDTFYVKRAPNGVDGSLGRALEVGTGYGNGDKLEI
TGIDVALNAKFETAIGDIGFNWNNSFVLDYIQEVEGGSEAVDIAGWNGSPDYKSNFTTNY
SMGDHRFSWNMSYTASTYEDDDTGHLDSWLIHNISYVYDAGNYGSLLLGVNNLTDEDPVL
SSVGIYENPDLYNNYGREYRASYTLKF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcataagaacgtattagctaaatcagtgcgcttagcactgatcagtggtgcagcagca
gctgcattcgcttcaccagcagtttttgctgctgatgaagatggcgcaaaagtagaacgt
attgaggttactggatcgcgcattaagcgttctgaccttgaaggcgcttcaccaattacg
actattacaactgaagatatgaagatggaaggtaactttacagttgctgacgcacttcgt
aacagtaacttgaactctttcggttcattctctgagcgttcaggtagttctgcacaatct
caagcaacgatcgatttacgtggtgcaggctcaagccgtaccctagtacttatcgatggt
aagcgtttcccaggttcacctactctaggtggtgcatctgctaacttgaacgctattcca
atggccgcagtagaacgtattgacattctgactgacggtgcatcttctacttatggttct
gacgcgattgctggtgttgttaacatcatcatgaagaagaattatcaaggtatcgaattc
aacgttggcggtggttctcgtgaccaagacggcggattaacgagtaaagaattctctgtt
gttgctggttatcaaatggacaaaggtaacattactttctcgtttgaccaccaggatcgt
aaaggtatttctgacgctgaccgtccatacactgcagcgagcatgacagatttcaacggc
gacggtgaaatccaagcttatgaagaaacttcaggttggagtatttatggtgcaactgta
gctgctccagatttctctactgcacaagcatcattattatgtaatgacttagaagcacag
tatggttcagatgtattccaaactgttaaagctgacaatgattggggtggagctggctct
acttattgtatgtatgcttttgctaacgtttcttataacaaagcatctacagagcgtaat
actgtttatgttgatgctaactatgaaattgcagaagacattgaatggtttggccgtgtg
atggttactgctggtaactcatttggtcgctatgcgcctccagcagcagcttggaatagc
atggcagcagataacccacataatccatatggtgaagaaactactggctatttccgttgg
gtgggtatcggtactcgtgacggtaacgttgatgattacaaccaagattatttaactggt
ttgcgtggtacgattagtgcactaaacgatgctgagtgggaattttactaccaccacaac
atcgccgataacaagtctatcggtgagtactacttaagctatgcaggtctagcttataac
caagcaaatgatattgatttaggctctgaagctggtatcaataacatgaaaaccacaacc
ttaacacaaggtcgtgctacatttgatcaatacagtgctggtattggttttgacgcgttc
gaactaccaggtggtgctgttgcacattacgttggtatggaatatttcgaccaacaatat
agcgaagtgtatgacgctcagtcagaagctggcttagttggtggtagtgctggtaactct
gctggtggcgatcgtcaagtatgggcaatgttctatgaagcggtattaccgttaacagat
gacattgaattaaaccttgcagctcgttacgatgattacagtgattttggtgataacgta
gcaccaaaagcttctgttcgctggcaagctcttgataacgttgtagtacgtgcatcttac
tctgaagcgttccgtgcgccttcattagatcagttgtatgcagcaacaacattcagtgct
gatacaggtaccgattatccgttctgtgaatctgcaggtatctctgatgcagattgtagt
tcaaaacagtatgatacttatattcgtgctaacgatagcctaggtcctgaaacatctaag
tatactaacttaggtgttgcatgggatatcgtcgatgatatcggtgttaaggtcgattac
tttaacttaaaaattgatgacgtaatcagtcgtcgtacaattaccaacgttatgcgtggt
attactctagcagaaaatgacactttctatgttaaacgtgctccaaatggcgttgatggt
tcattaggacgtgctttagaagttggtactggttacggcaacggtgacaaattagaaatt
actggtattgacgtcgcgctcaacgctaagtttgaaacggcaattggtgatatcggcttc
aactggaacaacagtttcgtgctagattatatccaagaagttgaaggtggttctgaagcc
gttgacatcgctggttggaatggttcacctgactacaagtctaactttaccactaactac
agcatgggcgatcacagattctcatggaacatgagctacacagcatctacttatgaagat
gatgacactggccatttagattcttggttaatccacaatatcagctacgtgtatgatgca
ggtaactatggttcattgttattaggtgttaacaacctaacagatgaagatccagtactg
agttctgttggaatatacgaaaaccctgatctatataacaactacggtcgtgaataccgt
gcaagttatactcttaagttctaa
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