Shewanella vesiculosa: KDH10_000502
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Entry
KDH10_000502 CDS
T08322
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svm03400
]
KDH10_000502
DNA repair and recombination proteins [BR:
svm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
KDH10_000502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
AAA_16
AAA_30
SLFN-g3_helicase
AAA_22
AAA
zf-tcix
T1R_D3-like
DZR
DUF3638
SNF2-rel_dom
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
UJL43242
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Position
complement(577120..578871)
Genome browser
AA seq
583 aa
AA seq
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MKDSSVKPAKITLRDYQQQSVDAAIAHFKQSQQSAVLVLPTGAGKSIVIAELARIANGNV
LVLTHVKELVAQNAEKVGLLTQEANIYSAGLNQKKANGKTVVASVQSAARALTKFTQPFS
LVIIDECHRVSNESTSQYQQLLIHLKAQNPNIKLLGLTATPYRLGLGWIYRVHYHGKVGN
TDTAVFDKCIFELPMRPLINKGYLTKPIIFDGLSAQYDFGDLEPNDSGEYPQMAIDSLLN
HQGRATTAIIKQVKQLAALRKGVLIFAATVRHANELMALLDKDAALITAKTPHNARDEII
QRFKAQDLKYIVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRLAADKTDCLI
IDYAANGYDLFYPEVGQTKPNSKSVPVQVHCPVCQFANIFWGIVDGDGDIIEHYGRRCQG
LISDNQQCDFRFRSKLCPDCGAENDIAARICNTCQSTLIDPDKRLKQVLNAQHHHLFKCE
QMLLLEHDNKLLIQYIDIEGNDFKQTFNFSTPAQRKAFYAVFVLSHTRTPGLKHPQYNKV
ADVLADQSRFRKPDLLLLKKNKYRWDLVDAFFDYQGKYKIDMS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagactcatctgttaaacctgcaaagataaccctacgtgattaccaacaacaatcc
gtagatgctgctattgctcattttaagcaaagccaacaatcagcagtattggttcttcct
accggtgcaggcaaaagtatcgtcattgccgaactagctcgcattgctaatggtaatgta
ctggtgctaactcacgtaaaggaattagtcgctcaaaatgccgaaaaggtaggcttactg
acacaagaagcaaatatctattctgccggattaaatcaaaagaaagccaatggtaaaacg
gtagtggccagcgttcaatcagcggctcgtgccctcacaaaatttacccaacccttttca
ttagtgattatcgatgaatgtcatcgagtgagtaatgagtctacgagccaatatcaacaa
ttgcttattcatcttaaagcgcaaaatcctaatataaaattacttggattaacggcaacg
ccttatcgtttaggtttaggctggatataccgtgtgcattaccatggaaaagtaggcaat
actgacaccgctgtttttgacaagtgcatttttgaactaccaatgcggccattaattaat
aaaggttatcttactaaaccgattatttttgacggactgagtgcccaatatgattttggt
gatctggagccaaatgacagcggagagtaccctcaaatggcaatagactccttgcttaat
catcaaggccgcgcaaccacagcaattatcaaacaggtgaagcaacttgcagcactgcgc
aaaggtgtattgatttttgctgcaaccgttagacatgctaatgaattgatggcgctttta
gacaaagatgctgcgttaattaccgctaaaacgccccataacgcacgtgatgagattatt
caacgctttaaggcccaagacctgaagtacatagtcaacgtagcagtgctcactacaggc
ttcgatgcgccacatgttgaccttatagcgatattaagaccaacagcgtcagtgagccta
ttccaacaaatgattggtcgaggtttacgcttagcagcggataaaaccgattgtttaatc
atcgattacgccgcgaacggttatgacctcttttatcctgaagttggccaaaccaagccc
aatagtaaatcagtgcctgttcaagtgcattgtcctgtatgccaatttgcaaacatcttt
tgggggatagtggatggggatggcgatataattgagcattatggaagacgctgccaagga
ttaatcagtgacaaccagcaatgtgactttagattcaggtcaaaattatgtcccgactgt
ggagctgaaaatgatatagcggcacgtatctgtaacacctgccaatcaaccttaattgat
cctgataaacgcttaaagcaagtacttaacgctcagcatcaccatttattcaaatgtgag
caaatgctattactcgagcacgacaacaagttacttattcaatatattgatattgagggt
aatgattttaagcaaacgtttaacttttcgacaccagcacaacgcaaagcgttttatgcg
gtatttgtactaagccacactcgcacgccaggtcttaagcatcctcaatataataaagta
gcagatgtattggcggatcaaagccgatttagaaaacctgatttattattgctaaagaaa
aacaaatatcgttgggatttagttgacgcattttttgactatcaaggcaaatataaaatc
gatatgagttaa
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