KEGG   Shewanella vesiculosa: KDH10_000502
Entry
KDH10_000502      CDS       T08322                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
svm  Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:svm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svm03400]
    KDH10_000502
DNA repair and recombination proteins [BR:svm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     KDH10_000502
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 DUF7577 AAA_16 AAA_30 SLFN-g3_helicase AAA_22 AAA zf-tcix T1R_D3-like DZR DUF3638 SNF2-rel_dom PrpR_N
Other DBs
NCBI-ProteinID: UJL43242
LinkDB
Position
complement(577120..578871)
AA seq 583 aa
MKDSSVKPAKITLRDYQQQSVDAAIAHFKQSQQSAVLVLPTGAGKSIVIAELARIANGNV
LVLTHVKELVAQNAEKVGLLTQEANIYSAGLNQKKANGKTVVASVQSAARALTKFTQPFS
LVIIDECHRVSNESTSQYQQLLIHLKAQNPNIKLLGLTATPYRLGLGWIYRVHYHGKVGN
TDTAVFDKCIFELPMRPLINKGYLTKPIIFDGLSAQYDFGDLEPNDSGEYPQMAIDSLLN
HQGRATTAIIKQVKQLAALRKGVLIFAATVRHANELMALLDKDAALITAKTPHNARDEII
QRFKAQDLKYIVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRLAADKTDCLI
IDYAANGYDLFYPEVGQTKPNSKSVPVQVHCPVCQFANIFWGIVDGDGDIIEHYGRRCQG
LISDNQQCDFRFRSKLCPDCGAENDIAARICNTCQSTLIDPDKRLKQVLNAQHHHLFKCE
QMLLLEHDNKLLIQYIDIEGNDFKQTFNFSTPAQRKAFYAVFVLSHTRTPGLKHPQYNKV
ADVLADQSRFRKPDLLLLKKNKYRWDLVDAFFDYQGKYKIDMS
NT seq 1752 nt   +upstreamnt  +downstreamnt
ttgaaagactcatctgttaaacctgcaaagataaccctacgtgattaccaacaacaatcc
gtagatgctgctattgctcattttaagcaaagccaacaatcagcagtattggttcttcct
accggtgcaggcaaaagtatcgtcattgccgaactagctcgcattgctaatggtaatgta
ctggtgctaactcacgtaaaggaattagtcgctcaaaatgccgaaaaggtaggcttactg
acacaagaagcaaatatctattctgccggattaaatcaaaagaaagccaatggtaaaacg
gtagtggccagcgttcaatcagcggctcgtgccctcacaaaatttacccaacccttttca
ttagtgattatcgatgaatgtcatcgagtgagtaatgagtctacgagccaatatcaacaa
ttgcttattcatcttaaagcgcaaaatcctaatataaaattacttggattaacggcaacg
ccttatcgtttaggtttaggctggatataccgtgtgcattaccatggaaaagtaggcaat
actgacaccgctgtttttgacaagtgcatttttgaactaccaatgcggccattaattaat
aaaggttatcttactaaaccgattatttttgacggactgagtgcccaatatgattttggt
gatctggagccaaatgacagcggagagtaccctcaaatggcaatagactccttgcttaat
catcaaggccgcgcaaccacagcaattatcaaacaggtgaagcaacttgcagcactgcgc
aaaggtgtattgatttttgctgcaaccgttagacatgctaatgaattgatggcgctttta
gacaaagatgctgcgttaattaccgctaaaacgccccataacgcacgtgatgagattatt
caacgctttaaggcccaagacctgaagtacatagtcaacgtagcagtgctcactacaggc
ttcgatgcgccacatgttgaccttatagcgatattaagaccaacagcgtcagtgagccta
ttccaacaaatgattggtcgaggtttacgcttagcagcggataaaaccgattgtttaatc
atcgattacgccgcgaacggttatgacctcttttatcctgaagttggccaaaccaagccc
aatagtaaatcagtgcctgttcaagtgcattgtcctgtatgccaatttgcaaacatcttt
tgggggatagtggatggggatggcgatataattgagcattatggaagacgctgccaagga
ttaatcagtgacaaccagcaatgtgactttagattcaggtcaaaattatgtcccgactgt
ggagctgaaaatgatatagcggcacgtatctgtaacacctgccaatcaaccttaattgat
cctgataaacgcttaaagcaagtacttaacgctcagcatcaccatttattcaaatgtgag
caaatgctattactcgagcacgacaacaagttacttattcaatatattgatattgagggt
aatgattttaagcaaacgtttaacttttcgacaccagcacaacgcaaagcgttttatgcg
gtatttgtactaagccacactcgcacgccaggtcttaagcatcctcaatataataaagta
gcagatgtattggcggatcaaagccgatttagaaaacctgatttattattgctaaagaaa
aacaaatatcgttgggatttagttgacgcattttttgactatcaaggcaaatataaaatc
gatatgagttaa

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