Shewanella vesiculosa: KDH10_000571
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Entry
KDH10_000571 CDS
T08322
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
svm
Shewanella vesiculosa
Pathway
svm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KDH10_000571 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svm02000
]
KDH10_000571 (msbA)
Enzymes [BR:
svm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
KDH10_000571 (msbA)
Transporters [BR:
svm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KDH10_000571 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
DEAD
ABC_ATPase
nSTAND3
AAA_23
RsgA_GTPase
acVLRF1
PRK
G-alpha
AAA_16
STT3_PglB_C
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UJL43298
LinkDB
All DBs
Position
652067..653869
Genome browser
AA seq
600 aa
AA seq
DB search
MSASPKNEMWIVFKRLMTYVVPMKAMFIMAVLGLITYGAVDAAFIAFIKPFIDEGFSQTP
AIVAGVDLPTHGGFNANKDIMLMAPIAVILMFSLRGLANFVSTYCVSFMSAQLIMDMRQQ
VFEHYLRLPVSYIDRENSGNLISRVTFDTEQIARASGSALISIVRDSMTAIGMLGIMFYY
SWKLSLCILVIGPIMGVVISIVSKRFRKVSKQIQSAMGGVTATTEQMIKGHKNVLVFGGQ
KTEVDRFYQVNDQNRYQNMKLAVAQSVSQPLIMVIGSFALAFVLYAATWDSMKTDLTAGT
FAAILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTPPEPDNGPFTIDRVQGKLT
FENVTFSYPGQDKPALNGIDFEVKPGKTIALVGRSGSGKSTIASLITRFYGGLSSGDIRL
DDTSIYDYQLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEVTREQIVRAAELAYAMEF
IETLPKGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQKG
LDNLRHNRTSIVIAHRLSTIESADEILVIDQGRVVERGNHSELIAQAGIYANLYQMQFSQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatcacctaaaaatgaaatgtggatcgttttcaaacgtttgatgacctatgtc
gtgccaatgaaagccatgtttattatggctgtactcggccttattacctatggcgctgtc
gatgcagcgtttatcgcatttattaaaccttttattgatgaaggttttagtcaaacgcca
gccatagtggcaggagtcgacttacctactcatggtgggtttaatgccaataaagacatt
atgttaatggcgccgattgcggttattttaatgttcagcttacgtggtttggctaacttt
gtgtcgacctattgtgtgtcgtttatgagtgcacagctcattatggatatgcgccaacaa
gtgtttgagcattatctgcgtttgcctgtaagttatatcgaccgcgaaaatagcggtaat
ttgatttcgcgcgtcacctttgatactgaacaaattgcccgagcatctggcagtgcgtta
atttcaattgttcgcgatagcatgaccgccatcggcatgctaggcattatgttctattat
tcgtggaaattatccttatgcatactagtgataggtccaattatgggcgttgtcatcagt
attgtgagtaagcgctttcgtaaggtgtctaagcagatccagtctgctatgggcggcgta
acggcaacgactgaacagatgattaagggccataaaaacgtattagtctttggtggtcaa
aaaacagaggttgatcgtttttatcaagttaacgaccaaaaccgttatcagaatatgaag
ctagcggtagctcaatctgttagtcagccattgatcatggttattggatctttcgcactg
gcgtttgtgttgtatgccgccacttgggatagcatgaaaaccgatctgaccgcaggtacg
tttgcggctattttaggtgccatgttggccatgctacaaccgattaagaacttaacccga
gttaatgcggagtttcaacgcggcattgcagcttgtactactgtatttgaattattagat
actccgcctgagcctgataatggcccgttcaccatcgatcgcgttcaaggcaaactgaca
tttgaaaatgtgaccttttcttatccagggcaagataaacccgctttgaacggcattgat
tttgaagttaaacccggtaaaaccatcgctttagtagggcgctctggctctggtaagtcg
actatcgcgagtttgattacgcgtttttatggtggattatcaagtggtgatattcgcctt
gatgacaccagcatttacgattaccaattaaaatcattgcgtaatcaagtggcgttagtg
tcgcagcaagtgaccttatttaacgacaccatagcgaataatattgcctatgcttaccca
ggcgaagttacccgcgagcaaatcgtccgcgccgctgagcttgcttatgcgatggagttt
atcgagacattgccaaaagggctcgatacccaagtgggcgaaaatggcgtgttgctttct
ggtggtcaacgtcaacgtattgcgattgctcgcgctatgttacgtgatgccccagtattg
attttagatgaagccacatcggctttagatactgagtctgaaaaagcgattcaaaaaggc
ctagataatctgcgtcataaccgtacctcaattgttatcgctcatcgtttatcgacaatt
gaaagtgctgatgaaatcttggttatcgatcaaggtcgagttgttgagcgcggtaatcac
agtgagttaattgctcaagctggtatttacgccaatctttatcagatgcagttcagtcaa
taa
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