Shewanella vesiculosa: KDH10_000744
Help
Entry
KDH10_000744 CDS
T08322
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00300
Lysine biosynthesis
svm01100
Metabolic pathways
svm01120
Microbial metabolism in diverse environments
svm01230
Biosynthesis of amino acids
Module
svm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDH10_000744 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svm01002
]
KDH10_000744 (dapE)
Enzymes [BR:
svm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KDH10_000744 (dapE)
Peptidases and inhibitors [BR:
svm01002
]
Metallo peptidases
Family M20
KDH10_000744 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UJL43445
LinkDB
All DBs
Position
complement(854750..855883)
Genome browser
AA seq
377 aa
AA seq
DB search
MNNDVVELAKDLISRPSVTPLDEGCQTLMAKRLAAIGFNIEPMVFEDTTNMWARRGNSDP
VFCFAGHTDVVPTGDLNRWHTPPFEPTIIDNYLHGRGAADMKGSLAAMIVATERFIAKHP
DHHGSIAYLITSDEEGPFINGTTRVIDTLEARNEKMTWALVGEPSSTHKLGDVVKNGRRG
SLTGNLTVNGIQGHVAYPHLADNPIHKAVPALTELAQMHWDSGNEFFPPTSFQIANINGG
TGASNVIPGDLQVMFNFRYSTEVTAEELIQRVVSILDAHGLDYDINWIFNGLPFLTGDGP
LLDATREAIREVTGYETDPQTSGGTSDGRFIAPTGAQVLELGPVNATIHKVNECVNVADL
EILANCYERILEKLLCK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgatgtagttgaattagcaaaagatctgatttcacgtccctcggtaacacca
ctggatgaaggttgccaaaccctgatggccaagcgtcttgctgccattggttttaatatt
gaacctatggtctttgaagacaccactaacatgtgggcaagacgaggaaacagcgatcct
gtattttgctttgctggccataccgatgtcgtccccactggcgacctgaaccgctggcat
actcctccgtttgagccgaccatcatagataactatttacatggccgcggcgcggcagac
atgaaaggctcgttagctgcaatgattgtcgcaactgaacgctttattgctaagcatccc
gaccatcatggttctatagcgtatttaattaccagtgacgaagaaggtccgtttatcaat
ggtaccacccgcgtgattgatacccttgaagctcgtaatgaaaaaatgacttgggcgtta
gttggcgaaccctcttctacccataagttaggtgatgtggttaaaaatggccgccgtgga
agcttaaccggtaatttgaccgttaatggtattcaaggtcatgtcgcttaccctcacctt
gcagacaacccaattcataaggcggttcctgcactaacagaactggcgcaaatgcattgg
gacagtggtaatgaatttttccctccaaccagtttccaaattgctaacattaatgggggt
acgggtgcgtcaaatgtgatcccaggcgatttacaagtcatgtttaacttccgttactcc
acagaagtcactgcagaagagctgatccaacgagtggtaagtattcttgatgcccatggc
ttagattatgatatcaattggatttttaatggcctaccatttctaaccggagatggccca
ctgcttgacgccacacgcgaagccattcgagaagtgactggttatgaaaccgatccacaa
acctctggtggtacttcagatggacgctttattgcaccaactggcgcccaagtgctggag
ctaggcccagtaaacgccactattcataaagttaacgagtgtgtcaacgtggctgactta
gagatattagccaattgctatgagcgtattttggaaaaactcttgtgcaaataa
DBGET
integrated database retrieval system
