Shewanella vesiculosa: KDH10_001046
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Entry
KDH10_001046 CDS
T08322
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svm03000
]
KDH10_001046
Transcription factors [BR:
svm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KDH10_001046
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF4765
Motif
Other DBs
NCBI-ProteinID:
UJL43709
LinkDB
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Position
complement(1228847..1229806)
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AA seq
319 aa
AA seq
DB search
MEHHFNQRAPKKSVVQTNDIDEQAHNLTQWQQVYDQVSNGSFYGCIEGLDYPDMHLFKEF
TQRALRQQCNIAPNSIWLGIPCRSEQSKINGLQLDTHQLMCRSSDYDFELITPEQFTIYG
VVLNQHSLYSMAEIQGLSLKNLSTRGAERIDCNPILLNQTRLMIEKLINHSELGLRTDLQ
QDMLSTLALNLLSQPASTQTVAPSYQHRLAVVEKVKAFIDDHPQQAVTITQLCELTFVSR
RTLQYSFESILGINPLRFLRLTRLNNVRRELKQPDLHHPISVIAANWGFWHPGQFTKDYT
QLFGENPSLTRQRYQPAQP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagcaccattttaatcagcgcgcaccaaaaaagagcgtggtgcaaaccaatgacatc
gatgagcaagcgcataatttaacccaatggcagcaagtttatgatcaggtcagtaacggc
agtttttatggttgtattgagggtctggattatccagatatgcatttattcaaagaattt
actcaacgagcattaaggcagcagtgcaacattgcgcctaattctatttggttgggcatt
ccatgtcgttctgagcaaagtaaaataaatggtttacagcttgatactcatcagttgatg
tgtcgaagcagtgattatgattttgagttaatcacccctgagcaatttactatttatggt
gtggtgcttaatcaacacagcttatattccatggctgaaatacaagggctgtcgttgaag
aacttatcaacacgaggggcggaacggattgattgcaatccaattttactaaatcaaact
cgtttgatgattgaaaagctgattaaccacagtgaattaggcttgcgcaccgatcttcag
caagacatgttaagcaccttagcactgaatttattaagccaaccagcatcaacgcaaacg
gtggcccccagttatcaacatcgtttagccgtcgttgaaaaagttaaagcttttatcgat
gaccatccgcaacaggccgtgaccatcactcaactttgtgagcttacttttgttagccgc
cgcaccctgcagtatagttttgagagtattttaggcattaatccattgcgttttttacga
ttaacccgtttgaataatgttaggcgagagcttaaacagcctgatctacaccaccctatt
tcagtgattgcggcaaactggggtttttggcatccaggccaatttactaaagattacacc
caattatttggcgagaatccatctcttacccgtcagcgatatcagccagctcaaccttga
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