Shewanella vesiculosa: KDH10_001223
Help
Entry
KDH10_001223 CDS
T08322
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00061
Fatty acid biosynthesis
svm00071
Fatty acid degradation
svm01100
Metabolic pathways
svm01212
Fatty acid metabolism
svm02024
Quorum sensing
svm04146
Peroxisome
Module
svm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KDH10_001223 (fadD)
00071 Fatty acid degradation
KDH10_001223 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KDH10_001223 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDH10_001223 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svm01004
]
KDH10_001223 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svm04147
]
KDH10_001223 (fadD)
Enzymes [BR:
svm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KDH10_001223 (fadD)
Lipid biosynthesis proteins [BR:
svm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KDH10_001223 (fadD)
Exosome [BR:
svm04147
]
Exosomal proteins
Exosomal proteins of breast milk
KDH10_001223 (fadD)
Exosomal proteins of breast cancer cells
KDH10_001223 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
UJL43853
LinkDB
All DBs
Position
complement(1442665..1444338)
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWINNLPEHVPAEIDPSQFSSLVDMFEDSVAKYADQPAFINMGATITYRKLEERSRA
FAAYLQNELHLKKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLVDS
GSKAIVVVSNFANTLEEIVEQTPIESVIITNLGDQLSAPKRTLVNFVVKYIKRLVPKYHL
PHALSFRDSLSKGRRLQYIKADIGGEDLAFLQYTGGTTGVSKGAMLSHKNVVSNVLQASG
AYSPALDDGAEFVVTALPLYHIFALTVNCLLFLHKGSKNLLITNPRDIPAFVAEMKKYPF
TVLTGVNTLFNALVNNEEFTQLDFSGLKLSIGGGMAVQRAVADKWQNLTKTRLLEGYGLT
EASPLVTCCPYNLSGYNGSIGFPAPSTTIQIRDEDSKVLAQGETGELFAKGPQVMQGYWQ
RPEETATVIDKDGWLATGDIGYMDEKGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNDASGELVKIFVVAKDKSLTEEELIKHCRHHLTGYKIPKLVEFRDELPKT
NVGKILRRQLRDEVNKA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagccttggattaataacttacctgaacatgttccggccgaaatcgacccatct
caattcagttctttagtcgatatgtttgaagattcagtagcaaaatatgctgatcagcct
gcgtttattaatatgggcgcgaccattacgtaccgaaaactcgaagaacgaagtcgagca
tttgcagcctacttacaaaatgaattacatttaaaaaaaggcgaccgtgtcgcccttatg
atgccaaatttactgcaatatcctattgctctgtttggtattttgcgtgctggtatggtg
gtggttaatgtcaatccactttataccccacgggaattaaagcatcaattggttgattct
ggctctaaagctatcgtcgtggtgtcaaactttgctaacaccttagaagagattgttgag
caaacaccgattgagtcggtgattattaccaatcttggcgatcaactcagtgccccgaaa
cgcacgttagttaattttgtggttaaatacatcaaaagattggtaccaaaataccattta
ccacatgcattatcgtttcgtgattcgctctctaaaggtcgacgcctacagtacattaag
gccgatattggtggcgaggatttggcttttttacagtataccggtggcacgactggagtc
tctaaaggtgctatgttaagccataaaaacgtggtcagtaacgttttgcaagccagtggt
gcttattctccagcccttgatgatggtgcagagtttgtcgtgacagcattgcctctgtac
catatttttgccctaacagtgaattgtttactgtttttacataaaggcagcaaaaattta
ttgatcaccaatcctcgtgacattcctgcttttgttgctgagatgaaaaagtacccgttt
actgtcttaaccggtgttaataccttattcaatgctttggtcaataatgaagaatttact
caacttgatttttctggtttaaaattgtctattggcggtggtatggcggtgcagcgtgcg
gtcgcggataaatggcaaaaccttactaagacacgcttactcgaaggttatggtttgact
gaagcttcaccattagttacatgctgcccatacaacctcagtgggtataatggttctatt
ggttttcctgcaccatcgaccacgattcaaattagagatgaagattcaaaagtattagct
cagggtgaaaccggcgagttatttgctaaaggtccgcaagtcatgcagggatattggcaa
cgtccggaagaaactgccactgtgattgataaagatggttggttagcgactggcgatatt
ggctatatggatgaaaaaggtttctttttcattgtcgatcgcaaaaaagacatgatttta
gtgtctggttttaacgtgttcccaaatgaagtggaagaggttgtcgcgttacatcccaag
gttattgaagtcgctgcggttggcgttcctaatgatgccagcggtgaattagtgaagatt
tttgtggtcgcaaaagacaagtcacttacagaagaagagttgattaagcattgtcgtcat
catttaacgggatataaaattcctaaactggtagaatttagggacgaattaccgaaaacc
aatgtgggtaaaattttacgccgacaacttcgagatgaagttaacaaagcataa
DBGET
integrated database retrieval system
