Shewanella vesiculosa: KDH10_001245
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Entry
KDH10_001245 CDS
T08322
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KDH10_001245 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svm01007
]
KDH10_001245 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svm03016
]
KDH10_001245 (pheT)
Enzymes [BR:
svm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
KDH10_001245 (pheT)
Amino acid related enzymes [BR:
svm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
KDH10_001245 (pheT)
Transfer RNA biogenesis [BR:
svm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KDH10_001245 (pheT)
Prokaryotic type
KDH10_001245 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
UJL43873
LinkDB
All DBs
Position
complement(1465117..1467504)
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AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPSVSRDALSHQITMAGLEVDGVDAVAGDFSGVIIGEVVECGQHPDAD
KLRVTKINVGGDELIDIVCGAPNCRLGLKVAVAMVGAILPGDFKIKKAKLRGQPSMGMLC
SYGELGMDIESDGIIELPLDAPLGVNVREYLQLDDAIIDVDLTANRADCLGMAGLAREVG
VLNRQAVTEPSWQAVTATIDAPFSINVVAPDLCPRYLGRVVKNINVKAATPLWMQEKLRR
SGIRSIDPIVDITNYVLIEFGQPMHAFDLATLNGGITVRLADGVEKLTLLDGNEITVPND
TLVIADDKQAVALAGVFGGESTGVSEHTQNILLECAFFSPLAIMGKSRRLGLHTDASHRF
ERGVDPELQHKVMDRATRLVLDICGGEAGQVIEALSAEHLPTAANITLRRSKLDKTLGHF
IPDSDVVEILERLGFSVQTNADVWNVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPM
AALSMSDHQEADISLKRVRSVFVARGFQEAVTYSFVDPKMQNIVHPGEEAMVLPNPISVE
MSAMRLSMFTGLLTAVGYNQSRQQNRVRLFETGLRFVPDAQADSGVRQQAMLGAVISGVQ
NDEHWSMESKTVDFFDLKGDLEAIIGLTVASTEFSFKGATHPALHPGQCAEILRNNRVIG
YIGAIHPSLEKPFGLNGKTIVFELELDALLHARLPLAQAVSKFPANRRDIAVVVDETVSA
TDVMNLIRKVGENQLVGLNLFDVYQGKGVEPGKKSLAIALTLQDTTRTLEDKDITEAMES
VVLALKTEFNASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaatcttggcttcgtgagtgggttaacccatcagtaagtcgtgacgca
ttatcacaccaaattaccatggccggccttgaagttgacggagttgatgctgtggctggc
gattttagcggcgtgatcattggtgaagtggttgaatgtggccagcatcctgatgccgat
aaactacgcgttaccaaaattaatgttggcggcgatgaacttatcgacatcgtttgtggc
gcaccaaactgccgtttaggcttaaaagttgcggtagctatggtcggcgcaatattgcct
ggcgattttaaaatcaaaaaagccaaattacgtggtcaaccatcaatgggcatgttgtgc
tcgtatggtgagttaggtatggacatcgaaagtgatggcattatcgaattaccactagat
gcgcctttaggcgtaaatgtgcgtgaatacttgcaattagatgacgccattattgatgtt
gatttaacggctaaccgtgctgattgtttaggcatggcagggcttgcgcgcgaagtgggc
gtattaaatcgccaagcagtgaccgagccttcttggcaagctgttacagcgactattgac
gcaccgtttagcattaatgttgtggcgccagatttgtgccctcgttacttaggccgtgtg
gttaagaacattaatgttaaagctgctacgccattatggatgcaagaaaagctacgtcgc
agcggtattcgttcaattgatccaattgttgatatcaccaactatgtgttgatcgaattt
ggtcagccaatgcatgcgtttgatttagctaccttaaatggcggcattactgtgcgtttg
gcagatggtgttgaaaagttaactttgctagatggtaacgaaattactgtccccaacgac
accttagtgattgccgacgataaacaagctgttgcattggcaggcgtgtttggtggtgag
agtaccggtgtgagtgaacacacccaaaacatccttttggaatgtgctttcttctcacca
ctagccattatgggtaaatcacgtcgtttaggcttacacacagacgcgtcacaccgtttc
gaacgtggtgttgaccctgagctacaacacaaggtgatggatcgtgctactcgcctagta
ttagatatctgtggtggtgaagcagggcaagtgattgaagctttgtctgcggagcattta
ccaacagcggctaatattactttgcgtcgtagcaagttagataaaaccttaggtcacttt
attcctgactctgacgtggttgaaatactagaacgtttaggttttagcgtgcaaaccaac
gctgatgtatggaatgtgaccaccgcgacttatcgttttgatatggcgattgaagaagat
ttgatcgaagaagtggcgcgtatttacggctacaacaacattcctaacgttgcccctatg
gctgcgttaagcatgtctgatcaccaagaagctgatatctcgcttaagcgtgtgcgcagt
gtgtttgttgcacgtggtttccaagaagcggtgacctacagctttgttgatccaaaaatg
cagaatattgtgcacccaggcgaagaagccatggtgttgccaaacccgatttcagttgaa
atgtcagccatgcgtttgtcgatgtttactggattattgactgctgtaggttataaccaa
agccgtcagcaaaatagagtacgtttatttgagaccggtttacgctttgttcctgatgcg
caagcagattctggtgttcgtcaacaagctatgctgggcgcggttatttctggtgttcaa
aatgacgaacattggtcaatggaatcgaaaactgtcgacttctttgatttaaaaggtgat
ttagaagcaataatcggcttgacagttgcctctacagaatttagttttaaaggggcaaca
catcctgcgctgcatccaggtcaatgtgctgaaatattgagaaataatcgagtcattggt
tacatcggtgctatccatcctagtttggaaaagccgtttggcctcaatggtaaaacaatt
gtttttgagttagaactggatgcattattgcacgcccgtttgccgctagcccaagctgta
tctaagtttcctgccaatcgtcgcgacatcgcggtagtagtagatgaaactgtttctgca
actgatgttatgaatttgataagaaaagttggcgaaaatcagttggttggcttaaacttg
ttcgatgtataccaaggtaaaggtgttgagcctggcaaaaagagcctagccatcgcactt
acgttacaagacactactcgcacacttgaagataaagatattactgaggctatggaatca
gtggtattggctctaaagaccgagttcaacgcatcgttgagggattaa
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