Shewanella vesiculosa: KDH10_001293
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Entry
KDH10_001293 CDS
T08322
Name
(GenBank) marine proteobacterial sortase target protein
KO
K07114
Ca-activated chloride channel homolog
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svm02000
]
KDH10_001293
Transporters [BR:
svm02000
]
Other transporters
Pores ion channels [TC:
1
]
KDH10_001293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA
VWA_2
VIT_2
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
UJL43908
LinkDB
All DBs
Position
complement(1521747..1523939)
Genome browser
AA seq
730 aa
AA seq
DB search
MRPFFLMPHFSVKHVYKLLCFGLLFVIYACVTRAFASPSGYQDNDISQGTLVYSTQNQVI
QALALDTQVSMDVSGLLNRVTVKQVFINDSDQWVNGRYVFPLPENAAVDSMQLRIGDKII
AGKIQPKKQALQTFETAKKQGKQASLLQQQRRNLFSSDVANLAPHEQLIVEISYQQQVEY
RDGMFSLRFPLAITPRYNPQGDHNSEPQQQTMPSSHNEVKPIVQAHSQLMVNMQVNIDAG
FELNSLNSLYHPIKQSSHGHYYNVSFAGKQIADRDFVLQWQANVGALPQAATFYQTGKTH
VTDNSNDFTDAKNVAGAEQRQANPVDNNLYSLVMLMPPSVEVSEQHLIARELILVIDTSG
SMSGQSIIQAKQALQFALAGLRDIDSFNIIEFNSDVSMLSATPLPANSRNINRANRFIQS
LDANGGTEMRSALQTALVDSVQAQQNDQTAKHNESMLRQVIFMTDGAVGNEHELYQLISN
QLGDSRLFTVGIGSAPNSDFMRRAATMGRGTFTYIGDEAEVQQKIEQLLHKIEQPVLTNI
GLYYLDGSVPDYWPTTISDLYQNEPLWVSIKSASHQQQPIIVSGNINGQYWQQQLDFDDN
QAAKGIDLLWANAQITSLELYKDSSNRQRVDKQVEALGILYHLVTSQTSLVAVDVTPVNP
LIDSPIDVQLQNHLPHGLQAAPSSQVLPQTGTASRLWLLIGFSLLGLGLLHYLWLRQRLP
GQVLVIESDD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgttttttttgatgccacatttttctgtaaagcatgtctataaattactgtgt
ttcggtttgttatttgtcatttatgcctgtgttacaagggcatttgcctcaccgtctgga
tatcaagataacgatatcagccaaggaaccttagtctattctacccaaaaccaagttata
caagccttagcgctggatactcaagtgagcatggatgtgtcgggtttgcttaatcgtgtc
acggttaagcaagtgtttatcaatgattcagatcaatgggttaacgggcgatatgtcttt
cctctacccgaaaatgccgccgttgatagcatgcagttacgcataggtgacaagattata
gcgggtaaaatccaacctaagaagcaagcattacagacgtttgagaccgctaaaaaacaa
ggtaaacaagccagtttattacagcaacagcgtcgtaacttattttcatcagatgtggcc
aatcttgctccgcatgagcagttaattgttgagatcagttaccagcaacaggttgaatac
cgcgatgggatgtttagtttacgttttccattagcgattacgccgcgttataacccgcaa
ggggatcataatagcgagccgcaacagcaaaccatgccgtctagccataatgaggtgaag
cctatagttcaagcccattctcaactgatggttaatatgcaagtaaacatagatgcaggg
tttgagttgaactcgctaaacagtctgtatcatccaattaaacagtcaagtcatggccat
tattacaatgtgagctttgcaggtaaacaaattgccgaccgtgattttgtgctgcaatgg
caagccaatgttggcgcattaccgcaagcggcgacattttatcaaaccggtaaaacccat
gtgacagataatagcaacgactttacggatgctaaaaatgttgcaggggcagagcaaaga
caagccaatcccgtagataataatttgtactcgttagtgatgttaatgccgcccagtgtc
gaggtgagtgagcaacatcttattgccagagaactgattttagttatcgacacctctggg
tctatgtctggtcaatcgattattcaggccaaacaagcattacaatttgccctcgctggg
ctgcgtgatatcgacagtttcaatattattgaatttaacagtgacgtcagtatgttgtcg
gcaacaccattgcctgccaatagtcgtaatatcaatcgagcaaatcggtttattcaatca
ttagacgctaatggtggtaccgaaatgcgcagtgcattacaaaccgcgctggtggacagt
gtccaagcacaacaaaacgatcaaactgctaagcataacgagtccatgttgcgtcaggtt
atttttatgacagatggtgcagtgggtaatgaacatgaactgtaccaattgattagtaat
caattgggtgacagtcgattatttactgttggcattggctctgcaccgaattcagacttt
atgcgccgagctgccactatgggccgtggcacatttacctatattggtgatgaggctgaa
gtgcagcaaaaaattgagcagttgttacataaaattgagcaaccagtgctaaccaatatt
ggcttgtattaccttgatggcagcgtaccggattactggccgacaaccattagcgacctg
taccaaaacgaaccactttgggtcagcattaaatcggcatcacaccagcagcaaccgatt
attgtctcaggtaatatcaatggtcagtattggcaacaacagcttgattttgatgataat
caagcagcaaaaggcattgatctattgtgggcgaatgcgcaaatcacctcactcgaattg
tataaagacagtagtaatcgtcaacgtgttgataaacaagtggaagcgttaggcatcctg
tatcacctagtgaccagccaaaccagtttagttgcagtagacgtgacaccggtaaatcca
ttaattgatagccctattgacgtgcaattacagaatcatctgccacatggtttgcaagcg
gcaccatcgtcgcaagtgctgcctcaaacgggaaccgccagtcgcttatggttattaatc
ggttttagcttattaggcttgggcttactgcactatttatggttaagacaacgtttacca
gggcaggtgttagtgattgaatcagatgattaa
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