Shewanella vesiculosa: KDH10_001365
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Entry
KDH10_001365 CDS
T08322
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
svm
Shewanella vesiculosa
Pathway
svm03030
DNA replication
svm03430
Mismatch repair
svm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDH10_001365 (dnaX)
03430 Mismatch repair
KDH10_001365 (dnaX)
03440 Homologous recombination
KDH10_001365 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svm03032
]
KDH10_001365 (dnaX)
03400 DNA repair and recombination proteins [BR:
svm03400
]
KDH10_001365 (dnaX)
Enzymes [BR:
svm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDH10_001365 (dnaX)
DNA replication proteins [BR:
svm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDH10_001365 (dnaX)
DNA repair and recombination proteins [BR:
svm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDH10_001365 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
ResIII
AAA_assoc_2
AAA_2
PIF1
RCF1-5-like_lid
AAA_18
AAA_7
TsaE
Motif
Other DBs
NCBI-ProteinID:
UJL43967
LinkDB
All DBs
Position
complement(1602778..1605672)
Genome browser
AA seq
964 aa
AA seq
DB search
MSYQVLARKWRPAKFDQMVGQSHVLMALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCETGVTATPCGECSSCIEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPHKLPVTVLSRCLQFNLKSLSQ
DEITKQLAYIISQENLPFEPQALSLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTM
LGSIDEKHVLALLKALCDADVGPLMQTVSKVLAFGADAEEVLRSLLELLHQITLTQFAPA
AAQQSLFSEQILAFAQQLAPEQVQLYYQMLLNGRKDLAFAPDPKSGLEMALLRAVAFTPE
KQVKRWVTTTPADINLSVIDHALPPTQEVIETGPKLDNQSQANSALAATILPVQAEAAAM
NVETDIDEVIDDEPAAASLIAEQALLLSQAQSQGFDEQSPQSRVDTQSHVDISAAAFAHS
TADNIAVSTEIGESTASDSKIDAPKHDTTEAQEFCEQQALAVNPTDTSSKSDVDANTAQD
SQENQHAQDADNGSFDGYSFTDYDASDEASMEYQPSDHDEYIAFSALNQTPETNSVDTAK
GSLSAPKTADHHSDASASNSVDNSVDDSTDISSKNVSHSIEQDLLRADDLDDFLDEVLAS
RDSLIADVGALQQKDELAKKEATKSVSSRVIKPSNSPAVNSEHLAAEPKTPESTAPNTSA
VLSAVATQSDNSPAVSDYDRPPWVAPKEGEQVNAFADVQSHDKSAVEATINQPSNVSQQV
NQQDLKPASAVVAANPHSMTEPKMTQSHAVAQFEPHSIQGDEVDLHWYKVMTHVSVGGRV
RQLGVNSVCSGLSNPIVLVLKPDQKHLSAQTAIDQLQVALTEYLEQPTEVQIQIGVVPKR
ETPLELRKRFHRELIAQAQQSILLDDKVQWMVQRLSAQLDSDSIEYPSEQLGQIAQEIAL
ISAS
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccaagtactcgcccgcaaatggcgtccagctaaatttgaccaaatggttggc
caatctcatgtattaatggcactaaccaatgcattaagtcagcaaaggttacatcatgct
tacctgtttaccggtacgcgcggtgtaggtaaaaccagtttggcgcgtttatttgctaaa
ggtctcaattgcgaaactggtgtaacggctacaccctgtggtgaatgttctagttgtatt
gaaattgctcaaggtcgatttgttgatttaattgaagtcgatgccgcttctcgtactaaa
gttgatgatacacgtgagctcctcgacaatgttcaatatcgtccttcacgtggccgtttt
aaagtgtatttaattgacgaagtacacatgttatcgcgtagcagttttaatgcattatta
aagacgttagaagaaccgcccgaacacgttaagtttttactggcgaccactgacccgcat
aaattacctgttaccgtattatctcgctgcttacagtttaatttgaaaagtttgtcgcaa
gatgaaattactaagcagttagcttatatcatcagccaagaaaacttaccttttgagcca
caagcattgagtttattagctaaagccgctaatggtagtatgcgtgatgcgcttagttta
acggatcaagctatcgcttttggtagtggtcaagtcatgttgacacaagtacaaaccatg
ctcggcagcattgatgaaaaacatgtgctggctttattaaaagccttatgtgacgctgat
gtgggtccattaatgcaaaccgtgtcaaaagtattagcatttggtgctgacgcagaagaa
gtactgcgcagtttattagagctactgcaccaaattaccttgactcagtttgccccagcg
gctgcgcagcaatcactgtttagtgaacaaattttagcgtttgcacagcaattagcgcct
gagcaagttcagctttattatcaaatgttacttaacggtcgtaaagatttggcttttgca
cctgatcctaaatcaggcttggaaatggcattattgcgcgccgttgcattcacccctgaa
aaacaagtaaaacgttgggtgacaactacacctgcagatattaatttaagcgtgattgat
catgctttacctcccacgcaagaggtcattgaaacaggcccaaagcttgataatcagtct
caagcgaatagcgcgttagcagcaacgatattaccagttcaagcagaagctgcggcgatg
aatgttgagactgacattgacgaggttattgatgatgagccagccgcagcctcactaata
gcagaacaagctttattgctcagccaagcacaaagccaaggttttgatgaacaatcgccc
caaagccgcgttgatacccaaagccacgttgatataagtgcagcggcgtttgctcattca
acggctgataatattgccgtgagcactgaaatcggtgaatcaactgcttcagacagcaag
attgatgcgcctaaacatgacaccactgaagcgcaagagttttgtgagcaacaggcatta
gctgttaatcccacagatacaagcagcaagagcgatgtcgacgccaataccgcacaagat
agtcaagaaaatcagcatgctcaggacgcagataatggatcatttgatggttattctttt
acggattatgatgcctctgatgaagcatcaatggaataccagccgtctgatcatgatgaa
tatattgctttttcggcgttaaatcagactccagagacgaacagtgttgatactgcaaag
ggctctctgtctgcgccgaaaacggcggatcatcatagtgatgcttcggctagcaacagt
gtagacaatagtgttgatgacagcactgacattagcagcaaaaatgtcagccatagcatt
gaacaagatttgcttcgcgctgatgatttagacgactttcttgacgaagtactcgctagt
cgtgattctctcatcgctgatgttggggcattacagcaaaaagatgaactcgccaaaaaa
gaagccactaaatcagtttcttcaagagtgatcaaaccatccaattcgccggcagtaaac
tcagaacacttagccgctgagcctaaaacgcctgaatctactgcgcccaataccagtgca
gtgttatctgctgtggccactcaaagcgacaattctccggctgtcagtgattatgataga
cctccttgggtcgcgcccaaagagggcgaacaagttaatgcatttgcagatgttcaatca
catgataaatctgccgttgaagccacaattaaccagccgagcaatgtttctcagcaggtt
aatcaacaagatctaaagcctgctagcgctgtcgtcgccgctaacccacatagcatgaca
gagcctaaaatgactcaatcgcatgcagtggcccagtttgagccacacagtatccaaggt
gatgaggttgatttgcactggtataaggtgatgacccatgtttctgttggtggtagggtg
cgacaattaggtgttaattcagtgtgctctggtttgtccaatccaatagtgttggtgtta
aaaccggatcaaaaacatttgtcagcgcaaacggctatcgatcaattgcaagtggcatta
actgaataccttgagcaaccgactgaagtacagatccagattggcgttgtaccaaaacga
gaaacaccgcttgagttacgtaagcgttttcaccgtgaacttatcgcacaggcgcaacag
tctattttgcttgatgataaagtgcagtggatggtccagcgtttatcagcgcaattagac
agtgacagtattgaatatccatcggagcaattggggcaaattgcccaagagattgcgctg
attagtgcctcataa
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