KEGG   Shewanella vesiculosa: KDH10_001454
Entry
KDH10_001454      CDS       T08322                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
svm  Shewanella vesiculosa
Pathway
svm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:svm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KDH10_001454 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svm03400]
    KDH10_001454 (xthA)
Enzymes [BR:svm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     KDH10_001454 (xthA)
DNA repair and recombination proteins [BR:svm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     KDH10_001454 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos FTSW_RODA_SPOVE
Other DBs
NCBI-ProteinID: UJL44037
LinkDB
Position
1711274..1712080
AA seq 268 aa
MKIVSFNINGIRARLHQLQALIDSHAPDIIGLQETKVHDEAFPVADVEAMGYKVHYHGGK
AHYGVAMLSKAEPISIIKGFESDNEDAQRRLIIGQFKQDNGRVLTVFNGYFPQGESIHHE
TKYPAKRKFYQDLMLYLEKHHQPSDDIAIIGDINISPTDLDIGIGEVNAKRWLKSGKCSF
QPEEREWLARLQQWGFIDSFRQLHPDRTERYSWFDYRSKGFDDNRGLRIDVILVTDSLVS
RVVESDVDYELRAIEKPSDHAPIWTTFS
NT seq 807 nt   +upstreamnt  +downstreamnt
atgaagattgtttcttttaacattaatggcatacgtgctcgactgcatcaattacaagca
cttatagacagccacgcgcctgacattattggcttacaagaaaccaaagtgcacgacgaa
gcctttccggttgcagatgttgaggcaatgggctacaaagttcattaccatggcggcaaa
gcacattatggcgtagccatgctgtcaaaagctgaacccattagcattattaaaggtttt
gaatctgataatgaagatgctcagcgtcgacttattattggccaatttaaacaagataat
ggccgagtattaacggtattcaatggatattttccacaaggtgaaagcattcaccacgaa
acaaaatacccggctaaacgtaagttttatcaagacttaatgctatatttagagaaacat
caccaaccaagcgatgacatagcaatcattggtgatattaatatatcgcccaccgattta
gatatcggcattggtgaagtgaacgctaaacgttggttaaaaagcggaaaatgtagcttc
caaccagaagaacgtgaatggttagcacgtttacaacaatggggctttattgatagtttc
cgccaattgcatccagatcgcactgaacgttactcgtggtttgattatcgtagtaaaggc
tttgatgataaccgtggtctgcgcatcgacgtgatattagtgaccgactcattagtttca
cgcgtcgtcgaatctgatgtcgattacgaattacgcgcgattgagaaaccgtccgatcat
gcgcccatttggactacgtttagttaa

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