Shewanella vesiculosa: KDH10_001656
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Entry
KDH10_001656 CDS
T08322
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svm03016
]
KDH10_001656 (truC)
Enzymes [BR:
svm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
KDH10_001656 (truC)
Transfer RNA biogenesis [BR:
svm03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
KDH10_001656 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UJL44603
LinkDB
All DBs
Position
complement(1955517..1956359)
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AA seq
280 aa
AA seq
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MDNDDLFGQISSDDMNYSAEDTDLDDVQPPHVEILFEDEHIVAIHKPAGLLVHRSYLARR
ERFFAMQMTRDLVGCHVFPVHRLDRPTSGVLLFAKSSEVARALCEQFADHSIKKQYLAII
RGNMHESGRLDYALKQEFDDLGDKHVDPNKAAQQAVTDYQPLLNAEIPFSSGRYPSSRFG
LVRLSPHTGRKHQLRRHMAHLRHPIVGDTTHGDGKQNKFFREHFGINRLWLIAKSLQFTH
PVTQQPMHIETELEAEWLDIFAAFGWDDDQLSSMPSMLLS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttggataatgatgatttatttgggcaaataagctctgatgacatgaattatagtgctgaa
gacactgacttagacgacgtacagcctcctcatgtcgagatattatttgaagacgagcat
attgttgcaatacataaacccgcaggtttattagttcatcgcagttatttagctcgaaga
gagcgtttttttgcgatgcagatgacccgtgatttagtgggttgtcatgtgtttccagtg
catcgcttagaccgtccgacatctggcgtattgctgtttgctaaatcgagtgaggtggct
cgggcattatgtgagcaatttgccgatcacagtattaagaagcaatacttagccattatt
cgtggcaatatgcacgagtctggcaggttagattatgccctgaaacaagaatttgatgat
ttgggggacaaacatgtcgatcccaataaagcagcacaacaagcggtgacggattaccaa
cctctattgaatgctgaaataccctttagctcaggtcgttatccttctagccgtttcgga
ttagtaagattaagccctcatactgggcgtaagcatcaattacgccgtcatatggcgcat
ttacgtcatcccatcgttggtgatactacccatggtgatggtaaacaaaataagtttttt
cgtgagcatttcggtattaatcgtttatggttgatagcaaaaagtttgcagtttacccat
ccggtgacacagcaaccgatgcatatagaaactgagttagaagcagaatggctagatatt
ttcgctgcatttggctgggatgatgatcaattatcatctatgccaagtatgttacttagt
taa
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