Shewanella vesiculosa: KDH10_001690
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Entry
KDH10_001690 CDS
T08322
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_001690
Enzymes [BR:
svm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
KDH10_001690
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KDH10_001690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_31
Methyltransf_25
Methyltransf_32
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UJL44227
LinkDB
All DBs
Position
2005311..2006687
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AA seq
458 aa
AA seq
DB search
MSHNISAMSNTTPSIETSASEIAAITPAHKRALSYSTTIETLFNQVMNTGMPADRIIGQY
FREHKKHGSKDRRVIRESLFGLFRWWGWLSQLETSHKHSTWFQQLSACAMLEQHPWHDVT
GAWNDFADWPQTRADQTTLDNQATLKDKLAAYIALSAIESCQITQLLPQWFWQLCPVDST
EQYALVNAMTTRPPIWARAQTLSTAKLITSLKQAGVEAKTSGYFADAISLGHKSINLNEI
EVYKQGHLEIQDLASQVIGQICQPNNHEKWWDACSGAGGKSLQLHSLMSQQSTKFSGNIT
ASDIRHKPLEELRKRAKRAGFEHISVAPWKGEVLPVDANAFDGVLVDAPCSCTGTWRRNP
DMRWLDDASAITDKPILQLAILRRSAAAVKSGGKLVYATCSLSPSENEQIVKDFLSVTSE
FELEPVIHPFTGEQFDMLTIWPQQADSDGMFVAKMRRK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagccataatatttccgccatgtctaacacaacaccatcaattgagacatctgcgtcc
gaaatcgctgcgatcacgccagcacataaacgcgccttaagttactcgacaacgattgaa
acactcttcaatcaagtgatgaacaccggcatgccagccgatagaatcattggccaatat
tttcgcgagcataaaaaacatggctctaaagatagacgagtgatccgtgaaagtttgttt
ggtttatttcgctggtggggttggttaagccagttagagaccagtcataaacacagtaca
tggttccaacaattaagcgcttgtgcaatgttagaacaacacccatggcatgatgtcact
ggtgcttggaatgattttgctgattggcctcaaacccgtgcagatcaaaccaccctagat
aatcaagccacattaaaagataaattagccgcttatattgctttaagcgcgatagaaagt
tgtcaaatcactcagttattaccccaatggttttggcaactttgtccagttgatagcaca
gagcaatatgcgcttgttaacgcaatgacgactcgcccccccatttgggctcgggcacaa
acattatcaacagccaaattaattacgtcacttaaacaagcgggtgttgaagctaaaact
agcggctactttgccgatgccattagtctagggcataaaagtattaatctaaatgagata
gaggtttataaacaaggtcatcttgaaattcaggatttagcctcacaagttattggccaa
atttgccagccaaacaatcatgaaaaatggtgggatgcgtgcagtggtgctggcggtaaa
tccctgcaattgcattcattaatgtcacagcaaagcacaaaattcagcggtaacattacg
gcatcagatattcgccataaacctttagaagaactgcgtaaaagagctaaacgtgcgggt
tttgagcatatcagtgtcgcgccatggaaaggagaggtattgcctgtcgatgctaatgct
tttgacggtgtattagttgatgcaccctgcagctgcactggcacttggcgtcgaaatcct
gatatgcgctggcttgatgatgctagcgcgattacagacaaacctatacttcaattagca
attttacgtcgaagcgctgctgcagtaaaatcgggcggtaaattggtttatgccacctgc
tctttatcaccaagtgaaaatgaacagattgtgaaagactttttatcagtaacgtctgag
tttgaacttgaaccagtcatacatccttttactggtgagcaatttgatatgttaacgatt
tggcctcaacaagccgatagtgatgggatgtttgttgctaagatgcgtcgtaaatag
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