Shewanella vesiculosa: KDH10_001719
Help
Entry
KDH10_001719 CDS
T08322
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
svm
Shewanella vesiculosa
Pathway
svm02020
Two-component system
svm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KDH10_001719
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KDH10_001719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
svm02022
]
KDH10_001719
02035 Bacterial motility proteins [BR:
svm02035
]
KDH10_001719
Two-component system [BR:
svm02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
KDH10_001719
Bacterial motility proteins [BR:
svm02035
]
Flagellar system
Flagellar assembly proteins
Others
KDH10_001719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
AAA_16
AAA_19
AAA_14
MerR
HTH_24
AAA_3
AAA_7
HTH_11
NPHP3_N
DUF2089
MCM
AAA_18
HTH_50
AAA_22
nSTAND3
HTH_23
FleQ
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UJL44250
LinkDB
All DBs
Position
complement(2033846..2035195)
Genome browser
AA seq
449 aa
AA seq
DB search
MAEANILLVEDDADLREALLDTLMLAHYDCVDVGSAEEAILALKVNHFDMVISDVQMDGI
GGMGLLSYLQQHQPKVPVLLMTAYATINSAVSAMKLGAVDYLAKPFAPEVLLNQVSRYLP
LKQNHDNPVVADEKSLALLALAQRVAVSDASVMIMGPSGSGKEVLARYIHQHSQRNEQPF
IAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTILLDEISEMELGLQAKL
LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKLLATSGEFREDLYYRINVFPLTWPALN
QRPADILPLARHLLAKHAKALNMTSVPKLDDAATRRLLTHRWPGNVRELDNVIQRALILR
VNDDIGVNDIIIDSADVKLVPTEYAETEQSIEVDGLGDELKAQEHVIILETLNQCQGSRK
KVAEKLGISARTLRYKMAKMRDMGIQLPA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagcaaatattctattagttgaagatgatgctgatttacgtgaagcattgctt
gatacactgatgcttgcccattacgactgtgttgatgttggcagtgctgaagaggctata
ttggccttaaaagtaaaccactttgatatggtgattagcgatgtgcagatggatggcatc
ggtggtatgggcttgctgagttatttacaacaacatcaacctaaagtgccggtattatta
atgaccgcatatgccacgattaacagtgctgttagtgcgatgaaattaggcgcagtagat
tatcttgctaagccttttgcaccagaagtgttattaaatcaggtatcacgctatttgcct
ttaaaacaaaatcacgacaatcccgtggttgccgatgagaaaagtttagcattgttggcg
ctggctcagcgcgttgcggtgtcagatgcttcggtcatgatcatgggcccgagtggttca
ggtaaagaagtgctggcacggtatattcaccagcatagccaacgtaatgagcagccattt
attgcgattaattgtgcggcgataccagaaaatatgttagaagccaccttatttggttat
gaaaaaggtgcatttactggtgcttatcaagcttgtccaggcaagttcgaacaagctcag
gggggcaccatattgcttgacgagatttctgaaatggaacttggcttacaagcaaagtta
ttgcgagtattacaagagcgcgaagtagagcgtttaggtggccgtaaaaccataaaatta
gatgtgagagttctcgcaacctcaaaccgcgatttgaaattgttggcgacgtctggcgaa
ttcagagaagatttatattaccgcattaacgtatttccactgacgtggccagcactaaac
caacgtcctgcggatattcttccgttagcacgtcatttattggcgaagcatgctaaagca
ttgaatatgacgtcggtgcctaaacttgatgatgcggcaactcgacggttactgactcat
cgctggccgggtaatgtgcgagagttagacaatgttattcaacgcgccttgatattacga
gtaaatgatgacattggtgtcaatgatattattatcgactctgctgatgtgaagttagtt
cccacagaatatgcagagacagagcagtctattgaagtagatggcttaggtgacgaatta
aaggcccaagaacatgtgattattttagaaaccttgaatcaatgtcaggggagtcgaaaa
aaggtcgctgaaaaactcggtataagtgctcgaacattacgttataagatggccaaaatg
cgtgatatgggcattcaacttcctgcttag
DBGET
integrated database retrieval system
