Shewanella vesiculosa: KDH10_001800
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Entry
KDH10_001800 CDS
T08322
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_001800 (der)
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
GTPases
KDH10_001800 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
SRP54
AAA_24
TniB
ABC_tran
NTPase_1
Ras
G-alpha
Motif
Other DBs
NCBI-ProteinID:
UJL44312
LinkDB
All DBs
Position
complement(2122221..2123687)
Genome browser
AA seq
488 aa
AA seq
DB search
MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLAGYEFIVVDTGGI
DGSEEGIETKMAEQSLAAIEEADVVLFMTDARAGMTAADLAIAQHLRSRDKVTFVVANKV
DGIDADSACGEFWSLGLGEVYQMAAAQGRGVTNMIDYALTPYAEAMGIVRELDEEGEQVE
REYTEEEAEAEQERLQNLPIKLAIIGKPNVGKSTLINRILGEERVVVYDEPGTTRDSIYI
PMSREGREYVLIDTAGVRRRSKVNEVIEKFSVIKTLKAVEDANVVLLVIDAREGIAEQDL
GLLGFTLNAGRALVIAINKWDGIDQKVKDRVKSELDRRLGFIDFARIHFISALHGTGVGH
LYESIEEAYDSATRRVSTSMLTRVMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVIH
GNQVKKLPDSYKRYMMNYFRRSLKVVGTPIQLRFHEGANPFEGRTEKLTVGQERRRKRAM
SHIRDRTK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgtagtggcccttgtagggcgaccgaatgtcggcaaatcgacattatttaac
cgtcttactcgtactcgtgatgcgttagtcgctgatttcccaggtttaacacgtgaccgt
aaatacggccgcgcatttttagctggctacgagtttatcgttgttgatactggcggtatt
gatggcagcgaagaagggatcgaaactaaaatggctgaacagtcattggccgcgattgaa
gaagcggatgtcgtattatttatgactgacgctcgtgcgggtatgacagctgccgattta
gcgattgctcagcatttacgtagccgtgataaagtcacttttgtggttgctaacaaagtc
gacggcattgatgccgattcagcttgtggtgagttttggtctttaggtctaggtgaagta
taccaaatggctgccgcgcaaggccgtggtgtgaccaacatgattgattacgcactaacg
ccttatgctgaagctatgggtatcgttcgcgaactcgacgaagaaggcgagcaagttgaa
cgtgaatatactgaagaagaagctgaagcagaacaagaacgcctgcaaaacttaccgatt
aagctcgccattattggtaagcctaatgtgggtaaatcaacactgattaaccgtatcctc
ggcgaagaacgtgtggtggtttatgacgaacccggtactactcgtgacagtatttatatt
ccaatgtcacgtgaaggtagagagtacgtattaattgatactgctggtgttcgtcgtcgc
agtaaagtgaatgaagttatcgagaaattctcggtgattaaaaccttaaaagcagttgaa
gatgctaacgtagtattattggttatcgatgcgcgcgaaggtattgcagagcaagatctt
ggtttattaggttttaccttaaacgctggtcgtgcattggttattgcgataaacaagtgg
gacggtattgatcaaaaagtcaaagaccgtgttaaaagcgaacttgatcgccgtttaggc
tttatcgatttcgcccgtattcactttatctcagcattacatggtactggcgttggccat
ttgtatgagtcaattgaagaagcctacgacagtgctacacgtcgtgtgagtacttcaatg
ctgactcgcgttatgcagatgtcgcaagatgatcaccaaccaccattggttaatggtcgt
cgtgtgaaactgaaatatgctcacgctggcggttataacccaccaatcgtggttattcat
ggtaaccaagttaagaagctacctgattcgtataagcgctatatgatgaactacttccgt
cgttcattgaaagtagttggtacgccaattcagttacgtttccacgaaggtgctaacccg
tttgaaggtagaactgaaaagttaaccgtgggtcaagagcgtcgtcgtaagcgtgcaatg
agccacattcgcgatcgtactaagtaa
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