KEGG   Shewanella vesiculosa: KDH10_001940
Entry
KDH10_001940      CDS       T08322                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
svm  Shewanella vesiculosa
Pathway
svm00740  Riboflavin metabolism
svm01100  Metabolic pathways
svm01110  Biosynthesis of secondary metabolites
svm01240  Biosynthesis of cofactors
svm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:svm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    KDH10_001940 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KDH10_001940 (ribD)
Enzymes [BR:svm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     KDH10_001940 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     KDH10_001940 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam APOBEC3
Other DBs
NCBI-ProteinID: UJL44430
LinkDB
Position
complement(2266838..2267983)
AA seq 381 aa
MANFSTFDTQMMSRAIALAEKGRYTTRPNPCVGCVIVANGQIIGEGYHQRAGQGHAEVNA
LKMVRDNGFSAQDATAYVTLEPCSHYGRTPPCALGLINAKVARVVIAVNDANPQVAGRGI
SMLRDAGIQVDIGLLTEQAYALNLGFMKRMKTGLPWVTVKIAASLDGKTALSNGVSKWIT
GDAARADVQKYRARHCALITGVETILVDDPSLNVRYEALGELTTCHTQEDIFQPLRVVLD
SQARLTSAQQLFSIQSPILLVSGCAYSDKVKIDFPQHVDFLQLECDSSGRIPLLALLTYL
GQHSNSVLVEAGATLAGAFVAQGLADEVVLYQAAKLLGSHGRNMLQLPDYSAMDQTPSLQ
LIDERSIGQDKRYILRYNQSY
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggctaacttttctaccttcgacactcaaatgatgagccgtgcgatagcactcgccgag
aaaggtcgttataccactcggccaaatccttgtgtcggttgcgtcattgtcgccaatggc
cagattatcggtgaaggttatcaccagcgtgcaggccagggccacgccgaagtcaatgcg
cttaaaatggttcgcgataatggcttttcggcacaagatgctaccgcgtatgtcactctt
gagccgtgtagccattacggccgcacaccaccttgtgctttaggcttaattaatgccaag
gtcgctcgagttgttattgctgttaacgatgccaatccacaggttgctggccgcggtatc
agcatgttacgtgatgcaggtattcaagttgatatcggattactgacagagcaagcttat
gcgctaaatttgggtttcatgaagcggatgaaaactggcttgccttgggtgacagtgaaa
atagccgccagtttagacggtaaaacagccctgtcgaatggagtgtcaaagtggattacc
ggtgacgctgccagggctgatgtgcaaaagtaccgagctaggcattgcgcattaatcact
ggggttgaaactattcttgttgatgaccctagcttaaatgtccgttatgaagcgctcggt
gaattaaccacttgtcatacgcaagaagacatattccagcctttaagggtggtgcttgat
agccaagctagattaacgtcagcccagcagttattttcgattcaaagtcctattttactg
gtttcaggctgtgcttattctgacaaggtcaaaattgactttccacagcacgttgatttt
ctgcaattagagtgtgactcgtcaggtagaatccctttgttagctttgctaacgtattta
ggtcagcatagcaatagcgtattagttgaagctggggcaacgttagccggcgcatttgtt
gcccaaggtctcgctgatgaagtagtgctttatcaggcagctaaacttttaggcagccat
ggacgtaatatgttgcagctacccgattacagtgcgatggatcaaacaccgtcgttgcaa
ttaatcgatgagcgtagcattggacaagataagcgatatatccttagatataatcaatcg
tattaa

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