Shewanella vesiculosa: KDH10_001981
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Entry
KDH10_001981 CDS
T08322
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svm03021
]
KDH10_001981 (nusA)
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_001981 (nusA)
Transcription machinery [BR:
svm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KDH10_001981 (nusA)
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
rRNA transcription factors
KDH10_001981 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
Glyoxalase_4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UJL44465
LinkDB
All DBs
Position
complement(2319046..2320545)
Genome browser
AA seq
499 aa
AA seq
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MNKEILLVAEAVSNEKGLPREKIFEALEIALATATKKKYEGDIEVRVAIDRKTGHYDTFR
RWMVVDDHGEALENPYSEITFEAARYEEPEIQVGEYIEDQIDSVAFDRITTQTAKQVIVQ
KVREAERAQIVEQFIEREGEIVTGVVKKSTRESVVVDLGNNADGVLFKEDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRSKPEMLIELFRVEVPEIYDELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVI
DLFVAYLDVDQDFAAVLADEGFTSLEEIAYVPESELLAIEGFDEGIVEALRERAKAAIST
RALASEEALDGAEPSDDLLALEGLERHLAYVLASKGVVTLEDLAEQGIDDLIDIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatcctgctagtcgcagaagcggtttccaatgagaaaggccttccgcgc
gaaaagattttcgaagcgctagaaattgcactggctaccgcaacaaagaaaaaatacgaa
ggcgatattgaagttcgcgttgcgattgatcgtaaaaccggtcattacgatactttccgt
cgttggatggttgttgacgatcatggcgaggctttggaaaacccatatagcgaaattacc
ttcgaagccgctcgttatgaagagccagagattcaagtaggtgagtatatcgaagatcaa
atcgactctgtcgcgtttgaccgtattactacacaaacagctaaacaagttatcgtgcaa
aaagtacgtgaagctgaacgtgcacaaattgttgaacaatttattgaacgtgaaggtgag
attgttactggtgttgttaagaaaagcacccgtgaaagcgtggttgttgatttaggtaat
aatgctgatggcgtattatttaaagaagatttaatcagccgtgaatctttccgtcctggt
gaccgtgtgcgtgcattattgtactcagttcgtccagaagctcgcggtgcgcagttattt
ttaactcgtagcaagccagaaatgctgattgagctatttcgggttgaagtgccagaaatt
tacgacgaattgattgaagtgatgggtgctgctcgtgatccaggcgctcgtgctaaaata
gccgttaaatcaaatgaccgtcgtatcgatccaattggtgcttgtgttggtatgcgtggt
gctcgagtgcaagccgtatcaaacgagttaggcggcgagcgtgttgatatcgtgttgtgg
gatgataatccagcgcaatatgtgatcaatgccatggcgccagctgatgttgcctctatc
attgtcgacgaagacaatcattcgatggatattgctgttgaagcagacagtttggcacaa
gctattggtcgtaacggccagaacgtacgtttagcgactcaactgactggttgggaactg
aacgtaatgacagttgaagacatgaacaaaaaacaccaagccgaaagcgctaaggtgatt
gacttgtttgtggcttatctagatgtagatcaagattttgcagccgtattggctgatgag
ggattcacttcgttagaagagatcgcttatgttccagaatctgagctattagcaatagaa
ggtttcgacgaaggaatcgttgaagcattacgtgaacgtgcaaaggccgctatctctaca
agagcattagcgtctgaagaagcgttagatggtgcagagccaagtgatgatttattagca
ttggaaggattagaaagacatttagcttatgttctagcgagcaaaggcgtagtgacttta
gaagacttggccgagcaaggtattgacgatttaattgatattgaagaattaacagaagaa
aaagcaggtgagctcatcatggctgcccgcaatatctgttggtttggcgaagaagcataa
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