Shewanella vesiculosa: KDH10_002010
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Entry
KDH10_002010 CDS
T08322
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svm03400
]
KDH10_002010 (dinB)
Enzymes [BR:
svm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDH10_002010 (dinB)
DNA repair and recombination proteins [BR:
svm03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
KDH10_002010 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
DNA_pol_lambd_f
DUF2203
HHH_5
Cdd1
Motif
Other DBs
NCBI-ProteinID:
UJL44490
LinkDB
All DBs
Position
complement(2353651..2354679)
Genome browser
AA seq
342 aa
AA seq
DB search
MRDFPELRGKPIAVGGRSDRRGVISTCSYEARKFGVRSAMSSYHALQLCPQLILVPGRMD
VYKSVSVQIREIFHRYTDLVEPLSLDEAYLDVTDCDAHQGSATLIAKAIRNDIFETTGLT
ASAGIAPIKFLAKIASDLNKPNGQYVITPNQISDFVKDLPLSKIPGVGKVTSKKLADIGL
TTCYDVQQYPKAQLIEVFGKFGHVLAERSQGIDPRQISPHRVRKSVGVETTLAKDIFTLE
QCRQVLPQLIQELSARVHRSAKDRQIHKQVVKLKFNDFKQTTIEHRSDEMSINLFHDLLQ
QALLRSQGRGIRLLGVSVGLADTTLAVTDNPVAHITQLDLQF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgattttcctgaattacgaggaaagcccattgctgttggcggcagaagtgatcgt
cgcggtgtgataagtacctgcagttatgaggcccgcaaatttggcgtgcgaagtgctatg
tccagttatcatgcactgcagctgtgtccgcagttaattttagtgccagggcgcatggat
gtatataaatcggtgtctgtgcaaatacgtgagatctttcatcgatacacagatcttgtc
gaacccttgtctctagacgaagcttatcttgatgtgactgattgcgatgctcaccaaggc
agtgccacgttaattgccaaggctattcgaaatgatatatttgagaccacaggtttaacc
gcctcagcgggtattgcaccgattaagtttttagctaaaatcgcttccgatttaaataaa
cccaatggccaatatgtcatcactcctaatcaaattagtgattttgtaaaagatcttcct
ctgagtaaaattcctggcgtcggtaaagtcacttcaaaaaagttagctgatattggctta
accacctgctacgacgtgcaacagtatccaaaagcgcaattaattgaggtatttggcaaa
tttggtcatgtattagctgagcgatcacaagggatagatccaagacaaattagtccgcat
cgggtacgaaagtctgttggggttgaaactacgttagccaaagacatttttaccttagag
caatgtcgtcaagtattaccacagcttatccaagaactgagtgctcgggttcatcgcagt
gctaaagatagacagatccacaagcaagttgtgaagctgaaatttaatgattttaaacag
accaccatcgaacatcgcagtgatgaaatgtcgattaatttgtttcatgatttactgcaa
caggctttgctgcgcagccaagggcgaggtattcgcttattgggggttagtgttggttta
gctgatacaacactggctgttactgataatccagtggcacatattactcagcttgatttg
cagttttaa
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