Shewanella vesiculosa: KDH10_002273
Help
Entry
KDH10_002273 CDS
T08322
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_002273
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
ribosomal protein modification factors
KDH10_002273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
UJL41327
LinkDB
All DBs
Position
complement(2652870..2655056)
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLKLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDISTENIKLSQNNIVDPEDRYNQIFQIQVELPDDISDKDRQGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGQPAGDTSTFILGKDLPLEQTIQNMTRLLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGEE
IANSEFVHYPNEKWFALEEDDALPSGLLDEYCLDIYNPDEELCGSHLIDTNSGNTDRGIC
AIPYTRQSDGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
VLPDVPMTVLEKFPSILAGIKGLEEQGFPVVVKDASLGGQFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFSGTSEEEAAGLFGILKAMGKEVYIAEFTDLGASACRILVPEYSEVY
PVDDLIWDNTNKALHYRKDILNLHSLSTKALSKLVNRLEESQLDNQTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGSHEDAIELVGEFLQFNDNTVQRGLFYQAVNAVLEVTLDDD
LELEHFMGNFNRMFGQEVMDNVVGSVNGTVRFYGLTKTSIKLEGIEPHLRLIESYKKLHQ
ARKAKAGI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaactttctcgacaatttgaaactcgaagccaaatttgacgacttt
accgttacggcagaccaacctattcgttataaaggtgatggctcagctccaagtcctttt
gattatttcttagcttcgtcagcgctttgtgctgcctactttattaaggtttattgtaaa
gcccgtgatatttctactgaaaatatcaagctttcgcaaaacaatattgttgacccagaa
gatcgctacaaccaaatttttcaaattcaggttgagttaccagacgatatttctgacaaa
gatcgtcaaggtattttacgttcaatcgatcgttgtactgttaaaaaagtggttcaaact
ggcccagaatttaaaattgaaaccgttgaaaaccttgatgctgacgccaatgccatgctg
atgggacaaccggctggcgacacgagtacctttattttgggcaaagacttgccactcgag
caaaccattcaaaacatgacccgtttattggctgatttgggcatgaagatcgaaatatct
tcatggcgcaacatagtgcctaacgtatggtcgttacacattcgtgatgccgcctcacct
atgtgttttactaacggtaaaggcgccacaaaagaaagcgcactatgctcggctttaggt
gagtttattgagcgtcttaataataactttttctataatgatcagttctttggtgaagag
atcgccaatagcgagtttgtgcattatcccaatgaaaaatggtttgcactggaagaggat
gatgcacttccatcaggtttgttagatgaatactgcttagatatttacaatccagatgaa
gagttatgtggctcgcacctaattgataccaactcaggtaatactgaccgaggtatttgc
gcgattccatatacccgtcaatctgatggtgaaacggtatattttccgtctaacttaatt
gaaaacttatttctaagtaacggcatgagcgcgggtaataatctgcaagaagcgcatgta
cagtgtttatctgaaatttttgagcgtgctgtaaaacgtcaaatcattgagcaagaaatt
gtactgccagatgttcctatgacagtacttgagaaattccctagcatattagcgggtatt
aaaggccttgaagaacagggtttccctgtcgtggtgaaagatgcttcgttaggtggtcag
ttcccagtgatgtgcgtcactttaatgaaccctagaaccggcggtgtatttgcctcgttt
ggtgcgcatccaagctttgaagtggcgttggagcgtagtttaactgaactattacaaggc
cgcagttttgaaggcttaaatgatgtgccaaagccgacattcaatagtatggccgtcact
gagcctgaaaactttgttgagcactttattgactcaacaggggttatctcttggcgcttc
ttcagtagtaagtttgactatgagttctgtgagtgggactttagcggcaccagtgaagaa
gaagccgcaggcttatttggtattttaaaagccatgggtaaagaagtgtatattgctgaa
tttactgatttaggtgcatcagcttgccgcattttagtgcctgaatattcagaagtgtat
cctgttgatgatttgatttgggacaataccaataaagcgcttcattaccgtaaagacatc
ttgaacctgcactcactaagcactaaagcgttatctaagttagtaaatcgcttagaagag
agtcaattagataatcagaccgatatccgtactttaatcggtattgtgtttgatgagaat
acggtttggggccagttaaccattattgaattaaaaattctgatttacctcgcattgggt
tctcatgaagatgcgattgagttagttggtgagttcttgcagtttaacgacaatacagta
caacgtggcttgttttaccaagccgtcaatgctgtgcttgaagtgaccctagatgacgac
ttagagcttgagcattttatgggtaactttaaccgcatgtttggtcaagaagtgatggac
aatgtggttggttcggttaatggcacagtgcgcttttatggcctaacaaaaactagcatc
aagctagaaggtattgagccacatttacgcttgattgaaagttacaaaaagctgcatcaa
gcgcgcaaagctaaagcgggtatatag
DBGET
integrated database retrieval system
