Shewanella vesiculosa: KDH10_002565
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Entry
KDH10_002565 CDS
T08322
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svm03000
]
KDH10_002565 (fis)
03036 Chromosome and associated proteins [BR:
svm03036
]
KDH10_002565 (fis)
03400 DNA repair and recombination proteins [BR:
svm03400
]
KDH10_002565 (fis)
Transcription factors [BR:
svm03000
]
Prokaryotic type
Helix-turn-helix
Other families
KDH10_002565 (fis)
Chromosome and associated proteins [BR:
svm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
KDH10_002565 (fis)
DNA repair and recombination proteins [BR:
svm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KDH10_002565 (fis)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
DCAF17
Xre-like-HTH
HTH_30
Phage_NinH
HTH_28
RWP-RK
UPF0175
Motif
Other DBs
NCBI-ProteinID:
UJL41582
LinkDB
All DBs
Position
2998223..2998528
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AA seq
101 aa
AA seq
DB search
MFDQTTNTEVHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFSQLDGQEASEVYEMVLCE
VEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcagacaactaacacagaagttcaccagcttaccgtaggcaaaatcgaaaca
gcaaacggcactatcaagccgcagttattacgtgacgcagtaaaacgtgccgtgactaac
ttcttctctcagttagacggtcaggaagcttctgaagtatatgaaatggtattgtgcgaa
gttgaagcacctttactagacatcatcatgcaacacactcgtggcaaccaaacgcgcgct
gctaatatgttaggtatcaaccgtggtactttacgtaagaaattaaagaaatacggcatg
aactaa
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