Shewanella vesiculosa: KDH10_002581
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Entry
KDH10_002581 CDS
T08322
Name
(GenBank) retention module-containing protein
Organism
svm
Shewanella vesiculosa
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_11
Big_9
Cadherin_5
HU-CCDC81_bac_2
CshA_repeat
Lactonase
DUF6897
Motif
Other DBs
NCBI-ProteinID:
UJL41592
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Position
3018910..3022542
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AA seq
1210 aa
AA seq
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METITTSKNGILSASEGKVTITINNETKELQLGQTIPAGALVSSSNEFAFVITFDDGTVF
NSADIPNDAITEQVADQQAIDEIAALQALIASGEDPTANLPETAAGTPTANQGDFGYVSV
SRDGGETIANAGYDTTGQTAAPTAVTQEEVLIENDSPSILLNDVIIVSEDQVASGNVLDN
DSDADSDLSVVNFEVDGQTYPAGTEIELEGGVLVINPDGSFTFSPNEDWNGTVPVITYTT
NTGVTATLTIEVTPVDDASVLVNDTNTVAEDTAATGNVLDNDSDIDSDLSVVSFEVGGQT
YAAGTEVTLDDGVLVLNADGSYTFTPNENWNGSVPVITYTTNTGVTATLTIEVTPVDDAS
VLVNDTNTVAEDTTATGNVLDNDGDVDSDLSVVSFEVGGQTYAAGTEVTLDDGVLVLNAD
GSYTFTPNENWNGSVPVITYTTNTGVTATLTIEVTPIDDASVLANDTNTVAEDTAATGNV
LDNDSDVDSDLSVSSFEVDGQTYTPGTEVALEGGALIINEDGSYTFTPNENWNGQVPVIT
YTTNTGNTATLTIEITPENDNFTDADEVISVAEDSSATTGSVLTGTSSVDGDVTVQSFSI
DGVTGPLTLGQAVTIAGVGSFTLSADGSYSFTPIANYNGPVPVITYVLTDGSSTDTSTLT
ITVTPENDNFTDADEVISVAEDSSATIGSVLTGTSSVDGDVTVQSFSIDGVTGPLTLGQA
VTISGVGSFTLSADGSYSFTPIANYNGPVPVITYVLTDGSSTDTSTLTITVTPENDNFTD
ANEVISVAEDSSATTGSVLTGTSSVDGDVTVQSFSIDGVTGPLTLGQAVTISGVGSFTLS
ADGSYSFTPIANYNGPVPVITYVLTDGSSTDTSTLTITVTPENDNFTDANEVISVAEDSS
ATTGSVLTGTSSVDGDVTVQSFSIDGVTGPLTLGQAVTISGVGSFTLSADGSYSFTPIAN
YNGPVPVITYVLTDGSSTDTSTLTITVTPENDNFTDADEVISVAEDSSATIGSVLTGTSS
VDGDVTAKSFSIDGVTGPLTLGQAVTIAGVGSFTLSADGSYSFTPIANYNGPVPVITYVL
TDGSSTDTSTLTITVTPENDNFTDADEVISVAEDSSATIGSVLTGTSSVDGDVTVQSFSI
DGVTGPLTLGQAVTIAGVGSFTLSADGSYSFTPIANYNGPVPVILCVNRRLEHRHVDLDH
HRHPRKRQFH
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaattactacgtcaaaaaatggaatactttctgcttcagaaggtaaggtaaca
ataacaatcaacaatgaaaccaaggaattacaacttggccagacaattcctgctggagca
ttagtttcaagcagcaatgagtttgcttttgttatcacattcgatgacggtactgttttt
aatagtgccgacattcctaatgatgccattaccgagcaagtagctgatcaacaagctata
gatgaaatcgcagctttgcaggcattaattgcatcaggcgaagacccaacagcaaactta
ccagaaaccgcagctggcaccccaacagccaaccaaggtgattttggttatgtctcagta
tcaagagatggtggcgagaccattgcaaatgcaggctacgacacgacaggacaaactgct
gccccaacagcagtgactcaagaagaagtgcttattgaaaatgattccccatcgatttta
ttaaatgacgtcattatagttagcgaagatcaagttgcttctggcaatgttttagataac
gacagcgatgctgactcagatttgagtgtagtgaattttgaagtagatggtcaaacctat
cctgcaggcacagaaatcgagcttgaaggtggcgtactcgtaattaatcctgatggttct
tttactttttctcctaatgaagactggaacggcactgttcctgttattacttacaccact
aataccggtgttaccgcgacgctaaccattgaagtcaccccagttgatgatgcatcggta
ttggttaacgacaccaatactgtggctgaagatactgctgccaccggcaatgtcctcgat
aacgacagcgatattgattcagatttaagcgtggtgagttttgaagtgggcggccaaacc
tatgcggccggcactgaagtcactcttgatgacggtgtgctcgtgctcaatgccgacggc
tcttataccttcacgccaaatgaaaactggaacggtagcgttcctgttattacttacacc
actaataccggtgttaccgcgacgctaaccattgaagtcaccccggttgatgatgcatcg
gtgttggttaacgacaccaatactgtggctgaagatactactgccaccggcaatgtcctc
gataacgatggcgatgtagattcagatttaagcgtggtgagttttgaagtgggcggccaa
acctatgcggccggcactgaagtcactcttgatgacggtgtgctcgtgctcaatgccgac
ggatcttataccttcacgccaaatgaaaactggaacggtagcgttcctgttattacttac
accactaataccggtgttaccgcgacgctaaccattgaagtcaccccgattgatgatgcc
tctgtattggctaacgacaccaatactgtggctgaagatactgctgccaccggcaatgtc
ctcgataacgatagcgacgttgattctgacctaagcgtgagtagctttgaagtggacggc
caaacttataccccaggtaccgaagtcgctcttgaaggcggtgcactgattatcaatgaa
gatggctcttacaccttcacccccaatgaaaactggaacggccaggtgccggtcattacc
tataccactaacactggtaataccgcgacactaacgattgaaatcaccccagaaaacgac
aatttcactgatgccgacgaagtcatttcggtggccgaagacagcagcgccaccaccggc
agcgtcttaactggcaccagctcggtggacggcgacgtcacggtgcaaagctttagcatt
gatggcgtgaccggccccttgaccttaggccaagcggtcaccattgccggcgtcggcagc
ttcaccttgagcgctgacggcagctacagcttcaccccgatagccaactacaacggccct
gtgccggtgatcacttatgtgttaaccgacggctcgagcaccgacacgtcgaccttgacc
atcaccgtcaccccagaaaacgacaatttcactgatgccgacgaagtcatttcggtggcc
gaagacagcagcgccaccatcggcagcgtcttaactggcaccagctcggtggacggcgac
gtcacggtgcaaagctttagcattgatggcgtgaccggccccttgaccttaggccaagcg
gtcaccattagcggtgtcggcagcttcaccttgagcgctgacggcagctacagcttcacc
ccgatagccaactacaacggccctgtgccggtgatcacttatgtgttaaccgacggttcg
agcactgacacgtcgaccttgaccatcaccgtcaccccagaaaacgacaatttcacggac
gccaacgaagtcatttcggtggccgaagacagcagcgccaccaccggcagcgtcttaacc
ggcaccagctcggtggacggcgacgtcacggtgcaaagctttagcattgatggcgtgacc
ggccccttgaccttaggccaagcggtcaccattagcggtgtcggcagcttcaccttgagc
gctgacggcagctacagcttcaccccgatagccaactacaacggccctgtgccggtgatc
acttatgtgttaaccgacggttcgagcactgacacgtcgaccttgaccatcaccgtcacc
ccagaaaacgacaatttcacggacgccaacgaagtcatttcggtggccgaagacagcagc
gccaccaccggcagcgtcttaaccggcaccagctcggtggacggcgacgtcacggtgcaa
agctttagcattgatggcgtgaccggccccttgaccttaggccaagcggtcaccattagc
ggtgtcggcagcttcaccttgagcgctgacggcagctacagcttcaccccgatagccaac
tacaacggccctgtgccggtgatcacttatgtgttaaccgacggttcgagcaccgacacg
tcgaccttgaccatcaccgtcaccccagaaaacgacaatttcactgatgccgacgaagtc
atttcggtggccgaagacagcagcgccaccatcggcagcgtcttaactggcaccagctcg
gtggacggcgacgtcacggcaaaaagctttagcattgatggcgtgaccggccccttgacc
ttaggccaagcggtcaccattgccggcgtcggcagcttcaccttgagcgctgacggcagc
tacagcttcaccccgatagccaactacaacggccctgtgccggtgatcacttatgtgtta
accgacggttcgagcaccgacacgtcgaccttgaccatcaccgtcaccccagaaaacgac
aatttcactgatgccgacgaagtcatttcggtggccgaagacagcagcgccaccatcggc
agcgtcttaactggcaccagctcggtggacggcgacgtcacggtgcaaagctttagcatt
gatggcgtgaccggccccttgaccttaggccaagcggtcaccattgccggcgtcggcagc
ttcaccttgagcgctgacggcagctacagcttcaccccgatagccaactacaacggccct
gtgccggtgatcttatgtgttaaccgacggctcgagcaccgacacgtcgaccttgaccat
caccgtcaccccagaaaacgacaatttcactga
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