Shewanella vesiculosa: KDH10_002794
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Entry
KDH10_002794 CDS
T08322
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
KDH10_002794
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UJL41769
LinkDB
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Position
complement(3253225..3255597)
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AA seq
790 aa
AA seq
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MHNIAQIIAQELNVREQQVTATIALLDDGATVPFVARYRKEATGGLDDTQLRNLFSRLGY
LRELHDRREVILSSIGAQGKLTPALTQAINDADSKTRLEDLYLPFKPKRRTKGQIAIEAG
IEPLVDAVLADRQLDLDSKASEFINPAAGFADIKAVLDGARFILMERFAEDAELLRKVRQ
HLSQQAVLESRMVKGKEKEGAKFRDYFEHNELMSKIPSHRALAMLRGRNEGMLSLSMNAD
PDNQAAEGSYCEVIISDHFGLRLSNSSVDEWLKTVVTSTWRIKVALQMETEFIAKMRESA
EEEAIKVFARNLGDLLMAAPAGAKATMGLDPGIRTGVKVAIVDNTGKLVAHTTIFPHAPQ
NLWDKSIRTLSNLVAMHKVSIIAIGNGTGSRETDKLTGELIAAMKETHPTLTKVIVSEAG
ASVYSASEFAANEFPNLDVSIRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVSQSQL
SQSLDAVVEDCVNAVGVDLNMASAPLLAQVAGLTKALAKNVVDFRDANGQFTNRKQLLSV
ARLGPKAYEQAAGFLRIRNGDNPLDSSSVHPEAYSLVESIANAKQLPLTELIGNSDLLKQ
INAADFVTDAFGIPTINDILAELDKPGRDPRGEFKTATFKDGIEELKHLKVEMILEGVVT
NVTNFGAFVDVGVHQDGLVHISSLTDKFVSDPHTIVKAGDVVKVKVMEVDIERRRIALSM
RLDEKIDTEKATRQSQPKPQNSHNKKSAAAKSSTNSQTAGHNKSTNKPVKVQQNAAMGNA
FADAFAKLKK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcataatattgcccagattatcgctcaagaacttaatgtccgtgaacaacaggtcaca
gcgaccattgcgctattagatgatggtgcaacagtgccgtttgtggcgcgttatcgtaaa
gaagcaaccggtggtttagatgacacccagttgcgtaacttgttttctcgcttagggtat
ttacgtgagttacacgatcgccgtgaagtgattttgtcgagtattggcgcccaagggaaa
ttaactccagcgttaactcaagcgattaatgacgccgacagtaaaacccgtcttgaagat
ttatacctaccattcaagccaaagcggcgcaccaagggccaaattgctatcgaagcaggt
attgagccgctggtcgatgctgtgttggctgatcgccaattagatctagatagcaaagcc
agtgaatttattaatcctgcagccggttttgccgacattaaagctgtgcttgatggtgca
cggtttattttaatggaacgctttgccgaagatgcagaattactgcgtaaagttcgccag
catttaagtcagcaagccgttcttgaaagtcgcatggtaaaaggcaaagaaaaagaaggc
gctaaattccgcgactactttgagcacaatgagttgatgagcaaaatcccatcacatcgt
gctttagccatgttacgcggtcgtaatgaaggcatgttaagcctatcgatgaatgccgat
cctgacaaccaagctgctgaaggcagttattgtgaagtgattattagcgatcactttggg
ctgcgtctcagcaacagtagtgttgatgaatggctgaaaacagtagtgacctcgacatgg
cggattaaagttgctctgcaaatggaaactgagtttattgccaagatgcgtgagagcgca
gaagaagaagctattaaagtgtttgcccgtaatctgggtgatttattgatggcagcacct
gcaggtgctaaagcgaccatggggcttgatcctgggattcgtacgggtgtgaaagtagcg
attgtagacaacacaggtaagctggtggcccacacgactattttcccccatgcaccacaa
aacttgtgggacaagtcgattcgcaccctaagtaacttagtcgcaatgcacaaagtgagc
attatcgcgattggtaacggtactggctcacgtgaaaccgacaagcttaccggcgagtta
attgcggccatgaaagagacgcatccaacgctgactaaagtgattgttagtgaagcgggg
gcatctgtgtattcggcttctgaatttgctgccaatgaatttcctaatcttgatgtatct
attcgtggcgctgtctctattgcacgtcgcttacaagatccgttggccgagctggtaaaa
attgaaccaaaagccattggcgtagggcaatatcagcatgatgttagccaaagtcagtta
tcgcagtcgctggacgctgtggtcgaagattgtgtgaatgccgtgggtgttgatttaaac
atggcatcggcacctttattggctcaagtggctggattaaccaaagctctagccaaaaac
gtggttgattttcgtgatgcgaatggccaatttactaaccgtaagcaactattgagtgtg
gcccgtttagggcctaaagcttatgagcaagcggcaggttttttacgtattcgtaatggc
gataatcctctggattcttcatctgttcaccccgaagcttacagcttggttgagtcgatt
gctaacgctaagcaattgccattaacagaactgatcggtaatagtgatttgttaaaacag
attaacgctgccgattttgtcactgacgcatttggtatacctaccattaatgatattttg
gccgaactagacaagcctggtcgcgatcctcgcggcgagtttaaaaccgcgacgtttaaa
gacggtatcgaagagttaaagcatcttaaagttgagatgattttggaaggcgtggtcact
aacgtgactaattttggtgcttttgtcgatgtgggcgtacatcaagatggtttagtgcat
atttcatcgttaaccgacaaatttgttagtgatccgcacaccatagtcaaagcgggtgat
gtggtgaaagtcaaagtcatggaagttgatattgagcgtcgtcgcattgcattaagtatg
cgtcttgatgaaaaaatcgatactgaaaaagcgaccagacagtcacaacctaagccacaa
aatagtcacaataaaaagtcagccgcggctaagtcgtcaactaattcccaaactgcgggg
cataataaatctactaataagccagtcaaagtgcagcaaaatgctgctatgggcaatgcg
tttgctgacgcttttgctaaacttaaaaaatag
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