Shewanella vesiculosa: KDH10_002988
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Entry
KDH10_002988 CDS
T08322
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
KDH10_002988
Enzymes [BR:
svm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KDH10_002988
Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KDH10_002988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Barwin
Motif
Other DBs
NCBI-ProteinID:
UJL44674
LinkDB
All DBs
Position
complement(3458001..3458390)
Genome browser
AA seq
129 aa
AA seq
DB search
MVAISRKFQFLTFSIMLAGCSSMPADVGGNWIGFTESGQASHYADRYQNKKTASGDLYRH
NQKTAAHKDLPFGSNVKVTNINNGKSVTVKINDRGPFVKGRIIDLSKSAFSSIGNVSTGL
LDVKIEVIR
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctatttcacgaaaatttcagtttttaacgttttccattatgttggcaggctgt
tcttcgatgccggctgatgttggtggcaattggatcggttttactgagtctggccaagcc
tcacattatgcagatagataccaaaataagaaaacggctagcggggatctctatcgccac
aatcaaaaaacagcagcccataaagatttaccattcggttcaaatgtaaaagtcaccaat
attaataatggtaaaagtgttaccgtcaaaatcaatgatcgtggtccgtttgttaaagga
cgcatcattgatctttctaagtcggcttttagcagtataggcaatgtatctacaggtctt
cttgacgttaaaatcgaagtgatccgttag
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