Shewanella vesiculosa: KDH10_002998
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Entry
KDH10_002998 CDS
T08322
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_002998 (rlmF)
Enzymes [BR:
svm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
KDH10_002998 (rlmF)
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KDH10_002998 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Methyltransf_23
Methyltransf_11
NMT
Motif
Other DBs
NCBI-ProteinID:
UJL41930
LinkDB
All DBs
Position
complement(3468377..3469402)
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AA seq
341 aa
AA seq
DB search
MTKRSPKRHSASAASSKPVLSKALHSRNAHKQGYDFDALIIAVPALAAFVRPNPYGNASI
DFADPHAVKCLNTALLLSEYNIRGWDIPNGYLCPPVPGRVDYLHYIADLLAVNGKVIKGA
SIRCLDIGTGANGIYPLLGIQSYGWQFVASDIDPVSIDNVDQIAQQNPQISTYLQLRLQQ
QPEHIFKGIISADERFDVSLCNPPFHSSLAEASAGTLRKVINLAKSQQKKHGQQSSQLAV
SQVKPTLNFGGQKAELWCDGGEQKFLANMIKQSRDYASQVLWFTSLVSKSENLKPCYQLL
KQVNAVEVKTIEMTQGNKATRILAWSFLTPALRQQWSTLRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcgctcgcctaaaagacattccgcctcagcagcgtccagtaaacctgtgctg
tcaaaagcgttgcattcgcgtaatgcccataaacaggggtatgattttgacgcactgata
atcgcagtgcctgcattggccgcttttgttcgtccaaatccttacggtaacgcctctatc
gattttgccgaccctcacgcggtaaaatgtctcaataccgctttattattgagtgagtac
aatattcgaggttgggatattcctaatgggtatctttgtccgccagtgcctggtcgtgtt
gattatttgcattacattgctgatttattggccgttaatggcaaggtgattaaaggggcg
agtattcgttgcttagatattggtacgggcgccaatggtatttacccattattagggatt
caaagctacggttggcaatttgtcgcatcggatattgaccctgtttctatcgacaatgta
gaccagatcgcccaacaaaatccgcaaatttcaacttatttacagttaaggttacagcaa
caacccgagcatatctttaagggtatcattagcgcagatgaacggtttgatgtcagcttg
tgtaacccgccgtttcacagctctttggctgaagcatcggcaggtacattacgtaaagtc
atcaatttagctaaaagccagcagaaaaagcatggccaacaatcaagtcaactcgccgtg
agccaagttaagcctacgcttaattttggcggtcaaaaagccgagttatggtgtgatggt
ggtgagcagaaatttttggccaacatgattaaacaaagccgcgactatgccagccaagtg
ctatggtttacctcattagtgtctaagtcagaaaaccttaaaccttgttatcaattactc
aaacaggtaaacgccgttgaggtaaaaaccattgagatgacacaaggtaataaagccaca
cgcattttagcgtggagttttttaaccccagcgttacgtcaacaatggtctacattaagg
cgttaa
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