Shewanella vesiculosa: KDH10_003089
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Entry
KDH10_003089 CDS
T08322
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svm02000
]
KDH10_003089
Transporters [BR:
svm02000
]
Other transporters
Pores ion channels [TC:
1
]
KDH10_003089
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UJL42001
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All DBs
Position
complement(3574946..3577711)
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AA seq
921 aa
AA seq
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MSTKGIATFGKRTTLALAIAGAIGSVHGVTAAEAAETQANEQIEVIAVKGIRSSLKNSMA
DKKSASVVSDGISAEDLGKFPDLNVAESLQRITGVSIDRSGGEGQAVTVRGFGPQFNTVL
VNGRQLATDSAGREFNFDILAADQITGANVYKTSNASMQEGGIGGTVDVTTARPFDYSGF
QLVGSVKGMYESLSEEVSPSISGLISNTFNDETMGVLLAVSHQERQVQINQINTGGWRGG
QTISNSRDGVLFTNAYIPRNWDQIVDEQDRTRTNGSLVFQYAPSEDVSITLDGFISKFEV
DSQVTDLASWFEPDRVGNATIDPATGTLLTFSQDIGLHQGSGDPATDFVSHTRNSRDVTN
SGVGLNVKWDINDQLKANFDVSNSNAENDRAGRDRFNVVGMTNSYAFDGTSGTPTVIHGG
FENGSLPDAGLSRLHYSEKGNQFTDEDEITEFKADFEYSPDSLVFTKAKFGVYRQEREKS
SYQIFGSQCQFCGYGTPAPNETINFRPYTANNYFSGLIDTFYTFDGDAMVDYLASEGYPI
TPTLQNNRYTINEDVSSLYMNFTFVYDVGDMPLTVDLGARYSTTDVEVSAVQSYITDIVP
TSDATLFQNIYGPATNITQGTTYSNLLPSVNVKLDLQDDMVLRFAMYDSLTRPTMSQLSP
ATNFNEPRRQNLTASGGNPSLEPFRSENWDISYEWYYDDASIFSFAFFSKEVNDFIVTLT
GDETYQMTDRTGPDFNCSTANSDLCSDAVVGTTEELNGQSEQYTVTRPRNGESARITGYE
VALTHIFDNGFGVTANATVVDSNVKVDANSTQSFALEGLGNSQNLIVFYEQDNFQARVAF
NNREGFLRQLDNGFNGEPINTETFGQWDISASYDITEHVSVFVEGINITEEELVQTGRFA
NQIYSVEDNGSRYSLGVRGKF
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaaaaggaatcgctacgtttggcaagaggacaacgttggcactcgctattgct
ggggcaattgggagtgttcacggcgttacagcagctgaagctgcagaaactcaagccaat
gagcaaattgaagtgattgctgtaaaagggatccgcagcagtttaaagaactcaatggcc
gacaagaaatccgcttctgtggtttcagatggtatttcggcagaagatctgggtaaattt
ccagacttaaacgtagcagagtcattgcaacgtattacaggtgtatcgattgaccgaagt
ggtggtgaaggccaggcagtaacggttcgtggctttggcccacaatttaatacggtgtta
gttaacggtcgtcaattagcgacagatagcgctggtcgggagtttaatttcgacatttta
gctgctgatcaaattactggtgctaacgtatataaaaccagcaatgccagcatgcaagaa
ggtggtataggtggtacggtcgacgtcacaaccgcgcgcccttttgattactcaggcttc
cagcttgttggttctgtgaaaggaatgtatgaaagcctttcagaagaagtttcaccttca
atttcaggtttgattagtaataccttcaatgacgaaactatgggtgtattacttgcggta
agccatcaagagcgtcaagttcaaattaaccaaattaacaccggcggttggcgtggtggt
caaactatctctaattcacgagatggtgtgttgtttaccaatgcttatattccacgaaac
tgggatcaaatcgttgacgaacaagaccgcactcgcaccaatggcagcttagtgtttcaa
tatgcgccatctgaagatgtcagcattaccttagacggttttatctctaaatttgaagtt
gattcacaagtcactgacttagcatcttggtttgaaccagaccgtgttggcaacgcaact
attgatccagcaacgggcaccttattaacctttagccaagatattggcttacatcaaggc
agtggcgatcctgcaactgattttgtgtcacatactcgtaactcacgcgatgtgactaac
agcggtgtcggcttaaatgttaagtgggacataaacgaccaattaaaagctaactttgat
gtttcaaactcgaatgctgaaaacgatcgtgctggtcgtgaccgtttcaacgttgtcggt
atgaccaacagctatgcatttgatggcacgagtggaactccaactgttatccatggtggt
tttgaaaatggcagcttacctgatgccggtctttctcgtttacattacagcgaaaaaggt
aatcaatttactgacgaagatgaaattactgagtttaaagctgatttcgaatattcacct
gattcattggtattcacaaaagcgaaatttggtgtgtaccgtcaagagcgtgaaaaatcc
agttatcagatttttggtagccagtgtcaattctgtggttacggtactccagcgccaaat
gaaaccattaacttcagaccctatactgcgaataactacttctctggtttaatcgatact
ttctacacttttgatggcgatgcaatggtcgattatttagcctctgaggggtatccaata
accccaacactgcaaaataatcgctatacaattaatgaagatgtcagcagcttatacatg
aacttcacgtttgtgtacgacgtaggtgatatgccattaacggttgatctaggtgctcgt
tactcaacaactgatgtagaagtaagcgccgtacaaagttatattactgacatagtgccg
actagtgatgcaacattatttcaaaatatatacggtccagcgacaaatattactcaaggc
acaacttactcaaacttgttgccaagcgtaaacgtgaagttagacctacaagacgacatg
gtgctacgttttgccatgtatgactctttaacacgtccaaccatgtcacagctatcccca
gcgactaactttaacgagccacgacgtcagaatttaacggctagcggtggcaacccatca
cttgaaccgttccgttccgaaaactgggatatctcttacgagtggtattacgatgatgcc
agcatcttcagctttgcatttttcagcaaagaggttaatgactttatcgtgacgttaacg
ggtgatgaaacttatcaaatgactgaccgtacaggccctgactttaactgcagcacagct
aactcagacttatgttctgatgcagtagttggcacaacagaagagctaaatggtcagtca
gaacagtatactgtgactcgtcctcgtaacggtgaatcagcacgtattactggttatgaa
gttgccttaactcatatcttcgacaacggctttggtgtcaccgccaacgctactgtggtt
gatagcaatgtgaaagtagatgctaacagcactcaaagtttcgcacttgaaggtttaggt
aattctcaaaacttaatcgtgttctatgagcaagataacttccaagcccgtgttgcattt
aacaaccgcgaaggcttcttacgtcagctagacaatggttttaatggtgagccaatcaat
accgaaacttttggacagtgggatattagcgccagctatgacattactgaacatgtatct
gtgtttgttgaaggcattaacatcactgaagaagagctagtgcaaacaggtcgtttcgcc
aaccaaatttattcggttgaagataacggatcgcgctattctctaggcgttagaggcaag
ttttaa
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