Shewanella vesiculosa: KDH10_003127
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Entry
KDH10_003127 CDS
T08322
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
svm
Shewanella vesiculosa
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
Mg_chelatase
HTH_30
AAA_2
MCM
HTH_50
AAA_22
AAA_16
nSTAND3
Phage_CP76
P-loop_TraG
CENP-B_N
HTH_7
HTH_28
HTH_Tnp_ISL3
HTH_29
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UJL42031
LinkDB
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Position
complement(3618958..3620322)
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AA seq
454 aa
AA seq
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MPRPTLFYHLHRQEGEARLLALPSSQHFNKIASSVDQSWLDQLKSNSIDVAIIELSQLSQ
QEYAELTDSSIMSDIELIFLTEGKPNPNLDHLMSKTAGYHFRQPYDADVINDTLEDFARD
FKSQSTKQKQPFSSELDQYGLLVGSSRAMHKLYRTIRKVAVTESNVLIVGESGAGKELVA
NTIHLASHRVDEPFIAINCGALSPELVDSELFGHVKGAFTGAHRDHRGVFEQAEGGTLFL
DEVTEMPLEHQVKLLRVLENNEYRSVGSQHLKKANVRIIAATNRDLADAIDAGHFREDLY
FRLAHFPIQVPPLRNRNNDISGLAQHFLAYRNTAEKLTKMFSDDALNLIQQQKWPGNVRE
LKHAIERAYILAENEILPSHIMVSSLEPSTEPLTDGVQIPVGMRLDELEKAAIYQALDES
MGNKNETAKQLGISVKTLYNKLSKYQDQTSPDEP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtccaacacttttttaccatttacaccgtcaagaaggtgaagctcgtctactt
gctttaccaagtagccagcactttaataagattgccagctcagttgaccagtcctggtta
gaccaactgaagagtaactcaatagacgttgctatcattgaactgtcacaattaagccaa
caagaatacgctgagctaactgacagttcgataatgtctgatattgagctcatcttctta
accgaaggtaagccaaaccccaacttagatcatttaatgtcaaaaacggctggttatcat
tttcgccagccttacgatgctgatgtgattaacgacacgctagaagactttgcccgagac
ttcaaatcgcaatcgactaagcaaaaacagcctttttcgagtgaactagaccaatatggt
ttattggttggttcatcgcgtgcgatgcacaagttatatcgcactattcgtaaagtcgct
gtcaccgagagcaacgtgctcatcgttggtgaaagcggtgcaggtaaagagctcgttgcc
aatactattcatttggctagtcatagagtcgacgaaccctttatcgcaattaactgtggt
gcattaagccctgaactggtcgacagcgaactgtttggtcatgtaaaaggcgcttttact
ggtgcccatcgagatcaccgtggtgtatttgagcaggcagaaggcggcaccttatttctt
gatgaagtcaccgaaatgccgttagaacaccaagtaaaattactacgcgtactcgaaaat
aatgaatatcgctcagtgggctcacaacatcttaaaaaagccaatgttcgtattattgcc
gccactaaccgcgatctagccgacgctattgatgcgggtcatttccgcgaagacttatat
tttcgtttagcgcattttcccatccaagtgccaccattacgcaaccgtaacaacgacata
agtggactcgcccagcactttttggcatatcgaaacacagctgaaaaactcacaaaaatg
ttttcagatgatgcacttaacctgatccaacaacaaaaatggcctggtaatgtccgcgaa
ttgaaacacgctattgaacgtgcatatattctggcagaaaacgaaattttaccgagccat
atcatggtgtcatcgctagaaccttcaacagagccgttaactgacggcgtacaaatacct
gtgggcatgcgcctcgacgaactagaaaaagctgcaatttatcaggcccttgatgaatct
atgggcaataaaaatgaaactgcaaaacaattaggtatcagcgttaaaaccctttataac
aagttaagtaaataccaagaccaaacgagtccagacgaaccttaa
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