Shewanella vesiculosa: KDH10_003257
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Entry
KDH10_003257 CDS
T08322
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svm03000
]
KDH10_003257
Transcription factors [BR:
svm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KDH10_003257
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
UJL42141
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All DBs
Position
3773277..3774065
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AA seq
262 aa
AA seq
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MFDAIGWDEIKNFEDMPQAIIAKIEHTCASHEIPLHTHPKGQLILALHGYVTCEVSAKMW
MVPTHSAIWIPANKVHSNRASDNAQLCHLFIDNTMFKMPLNTCTLAITPLVKELMCELAG
RDQHYDLSSNTARLAQVLLDQLIEMPIQHLDVALSKHVVVQAMSQQLISQPSDRKTLPQW
AEQFALTERTLARLIKKETGMTFGKWRTQIHIITSLQALSDKHSVQHVSELLGYESVSAF
ITMFKKVMKKSPMKYMSELKAY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcaattggctgggatgaaatcaagaattttgaagatatgccgcaagctatt
atcgccaaaattgagcatacctgtgccagccacgaaattccgttacacactcaccctaaa
gggcagttgattttagctttgcatggttatgtcacctgtgaggtgtctgcaaaaatgtgg
atggtgccaacccatagtgccatttggatcccggcaaataaagtccacagtaaccgcgca
tcagacaacgcccagttatgtcacttatttattgacaatacgatgttcaaaatgccgctc
aatacttgtactttggcgattacgcccttagtaaaagagctgatgtgtgagcttgcaggg
cgtgatcagcattatgatttatccagtaacacggcacgattagcgcaggttttattggat
caactgattgagatgcctattcagcatttagatgttgccttgtctaaacatgttgttgtt
caggcgatgagtcaacaattgataagccaacctagtgacagaaaaacactaccacaatgg
gccgaacaatttgcattaaccgagcgtacattggcgcggctgatcaaaaaagaaaccggt
atgacatttggaaagtggcgcacccaaattcatattattacctcactgcaagcgctgtca
gataagcacagtgtgcagcatgtttctgagttattaggctatgagtcggtcagtgctttt
attaccatgtttaaaaaagtcatgaaaaaatcaccaatgaagtacatgagcgaattaaag
gcttactag
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